Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Mmp8O70138 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Mmp8O70138 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Mmp8O70138 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Mmp8O70138 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
Mmp8O70138 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Mmp8O70138 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Mmp8O70138 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Mmp8O70138 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Mmp8O70138 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Mmp8O70138 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Mmp8O70138 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Mmp8O70138 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Mmp8O70138 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.44■■■□□ 2.62
Mmp8O70138 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Mmp8O70138 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Mmp8O70138 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.41■■■□□ 2.62
Mmp8O70138 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.41■■■□□ 2.62
Mmp8O70138 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.41■■■□□ 2.62
Mmp8O70138 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Mmp8O70138 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.37■■■□□ 2.61
Mmp8O70138 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Mmp8O70138 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Mmp8O70138 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Mmp8O70138 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Mmp8O70138 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.32■■■□□ 2.6
Mmp8O70138 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Mmp8O70138 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Mmp8O70138 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Mmp8O70138 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Mmp8O70138 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Mmp8O70138 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Mmp8O70138 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Mmp8O70138 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Mmp8O70138 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Mmp8O70138 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Mmp8O70138 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Mmp8O70138 Zfp131-205ENSMUST00000223812 663 ntBASIC31.25■■■□□ 2.59
Mmp8O70138 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Mmp8O70138 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Mmp8O70138 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
Mmp8O70138 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Mmp8O70138 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Mmp8O70138 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.21■■■□□ 2.59
Mmp8O70138 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Mmp8O70138 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Mmp8O70138 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Mmp8O70138 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Mmp8O70138 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Mmp8O70138 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Mmp8O70138 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Mmp8O70138 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Mmp8O70138 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
Mmp8O70138 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Mmp8O70138 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.13■■■□□ 2.57
Mmp8O70138 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Mmp8O70138 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Mmp8O70138 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Mmp8O70138 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.09■■■□□ 2.57
Mmp8O70138 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Mmp8O70138 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31.06■■■□□ 2.56
Mmp8O70138 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
Mmp8O70138 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Mmp8O70138 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Mmp8O70138 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.03■■■□□ 2.56
Mmp8O70138 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Mmp8O70138 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Mmp8O70138 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Mmp8O70138 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31■■■□□ 2.55
Mmp8O70138 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
Mmp8O70138 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Mmp8O70138 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Mmp8O70138 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Mmp8O70138 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.98■■■□□ 2.55
Mmp8O70138 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Mmp8O70138 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.97■■■□□ 2.55
Mmp8O70138 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Mmp8O70138 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Mmp8O70138 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Mmp8O70138 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Mmp8O70138 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Mmp8O70138 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Mmp8O70138 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Mmp8O70138 Zxda-201ENSMUST00000117281 2621 ntBASIC30.93■■■□□ 2.54
Mmp8O70138 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Mmp8O70138 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Mmp8O70138 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.9■■■□□ 2.54
Mmp8O70138 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Mmp8O70138 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Mmp8O70138 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Mmp8O70138 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.85■■■□□ 2.53
Mmp8O70138 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Mmp8O70138 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.84■■■□□ 2.53
Mmp8O70138 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Mmp8O70138 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Mmp8O70138 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
Mmp8O70138 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.82■■■□□ 2.52
Mmp8O70138 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Mmp8O70138 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Mmp8O70138 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms