Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pde6dO55057 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.82■□□□□ 0.76
Pde6dO55057 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pde6dO55057 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6dO55057 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pde6dO55057 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.81■□□□□ 0.76
Pde6dO55057 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pde6dO55057 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pde6dO55057 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pde6dO55057 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pde6dO55057 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.78■□□□□ 0.76
Pde6dO55057 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pde6dO55057 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Pde6dO55057 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pde6dO55057 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6dO55057 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6dO55057 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pde6dO55057 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pde6dO55057 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pde6dO55057 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pde6dO55057 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pde6dO55057 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6dO55057 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pde6dO55057 Mipep-204ENSMUST00000225043 1548 ntBASIC19.71■□□□□ 0.75
Pde6dO55057 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6dO55057 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pde6dO55057 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pde6dO55057 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6dO55057 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pde6dO55057 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pde6dO55057 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pde6dO55057 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.67■□□□□ 0.74
Pde6dO55057 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pde6dO55057 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pde6dO55057 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.64■□□□□ 0.73
Pde6dO55057 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.63■□□□□ 0.73
Pde6dO55057 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6dO55057 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6dO55057 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.63■□□□□ 0.73
Pde6dO55057 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pde6dO55057 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.62■□□□□ 0.73
Pde6dO55057 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Pde6dO55057 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.62■□□□□ 0.73
Pde6dO55057 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6dO55057 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pde6dO55057 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6dO55057 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pde6dO55057 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pde6dO55057 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6dO55057 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pde6dO55057 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6dO55057 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pde6dO55057 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pde6dO55057 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pde6dO55057 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6dO55057 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pde6dO55057 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pde6dO55057 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6dO55057 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6dO55057 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6dO55057 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pde6dO55057 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.55■□□□□ 0.72
Pde6dO55057 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6dO55057 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6dO55057 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pde6dO55057 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6dO55057 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pde6dO55057 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.53■□□□□ 0.72
Pde6dO55057 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Pde6dO55057 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6dO55057 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6dO55057 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.52■□□□□ 0.72
Pde6dO55057 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pde6dO55057 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pde6dO55057 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pde6dO55057 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Pde6dO55057 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6dO55057 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pde6dO55057 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6dO55057 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6dO55057 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Pde6dO55057 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pde6dO55057 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6dO55057 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.48■□□□□ 0.71
Pde6dO55057 Gm25238-201ENSMUST00000174914 89 ntBASIC19.48■□□□□ 0.71
Pde6dO55057 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6dO55057 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6dO55057 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6dO55057 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6dO55057 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pde6dO55057 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.46■□□□□ 0.71
Pde6dO55057 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.45■□□□□ 0.7
Pde6dO55057 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6dO55057 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pde6dO55057 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6dO55057 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6dO55057 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6dO55057 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pde6dO55057 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.43■□□□□ 0.7
Pde6dO55057 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms