Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
Tcof1O08784 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Tcof1O08784 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Tcof1O08784 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
Tcof1O08784 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30■■■□□ 2.39
Tcof1O08784 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30■■■□□ 2.39
Tcof1O08784 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Tcof1O08784 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Tcof1O08784 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Tcof1O08784 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Tcof1O08784 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
Tcof1O08784 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Tcof1O08784 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Tcof1O08784 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.97■■■□□ 2.39
Tcof1O08784 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Tcof1O08784 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Tcof1O08784 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.95■■■□□ 2.38
Tcof1O08784 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Tcof1O08784 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
Tcof1O08784 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.94■■■□□ 2.38
Tcof1O08784 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Tcof1O08784 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Tcof1O08784 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Tcof1O08784 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Tcof1O08784 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.87■■■□□ 2.37
Tcof1O08784 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Tcof1O08784 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Tcof1O08784 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Tcof1O08784 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Tcof1O08784 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Tcof1O08784 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
Tcof1O08784 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.82■■■□□ 2.36
Tcof1O08784 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.81■■■□□ 2.36
Tcof1O08784 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Tcof1O08784 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Tcof1O08784 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Tcof1O08784 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Tcof1O08784 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
Tcof1O08784 Gm9397-201ENSMUST00000200125 605 ntBASIC29.75■■■□□ 2.35
Tcof1O08784 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.75■■■□□ 2.35
Tcof1O08784 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.73■■■□□ 2.35
Tcof1O08784 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Tcof1O08784 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Tcof1O08784 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
Tcof1O08784 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Tcof1O08784 Gm45855-201ENSMUST00000212546 880 ntBASIC29.71■■■□□ 2.35
Tcof1O08784 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Tcof1O08784 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.71■■■□□ 2.35
Tcof1O08784 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.71■■■□□ 2.35
Tcof1O08784 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Tcof1O08784 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
Tcof1O08784 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.7■■■□□ 2.34
Tcof1O08784 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.68■■■□□ 2.34
Tcof1O08784 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Tcof1O08784 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
Tcof1O08784 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Tcof1O08784 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.66■■■□□ 2.34
Tcof1O08784 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Tcof1O08784 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.64■■■□□ 2.34
Tcof1O08784 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Tcof1O08784 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Tcof1O08784 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Tcof1O08784 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
Tcof1O08784 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.59■■■□□ 2.33
Tcof1O08784 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Tcof1O08784 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
Tcof1O08784 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Tcof1O08784 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.58■■■□□ 2.33
Tcof1O08784 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.58■■■□□ 2.33
Tcof1O08784 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Tcof1O08784 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.56■■■□□ 2.32
Tcof1O08784 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Tcof1O08784 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Tcof1O08784 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
Tcof1O08784 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Tcof1O08784 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Tcof1O08784 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Tcof1O08784 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Tcof1O08784 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Tcof1O08784 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Tcof1O08784 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
Tcof1O08784 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Tcof1O08784 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Tcof1O08784 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Tcof1O08784 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.51■■■□□ 2.32
Tcof1O08784 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Tcof1O08784 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
Tcof1O08784 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Tcof1O08784 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.5■■■□□ 2.31
Tcof1O08784 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Tcof1O08784 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Tcof1O08784 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Tcof1O08784 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.46■■■□□ 2.31
Tcof1O08784 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.46■■■□□ 2.31
Tcof1O08784 Gm24970-201ENSMUST00000175582 82 ntBASIC29.45■■■□□ 2.31
Tcof1O08784 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Tcof1O08784 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.45■■■□□ 2.3
Tcof1O08784 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Tcof1O08784 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Tcof1O08784 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms