Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
AlyrefO08583 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
AlyrefO08583 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.03■■□□□ 1.76
AlyrefO08583 Gm11175-201ENSMUST00000116172 543 ntBASIC26.02■■□□□ 1.76
AlyrefO08583 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.01■■□□□ 1.75
AlyrefO08583 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
AlyrefO08583 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
AlyrefO08583 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
AlyrefO08583 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
AlyrefO08583 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
AlyrefO08583 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
AlyrefO08583 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.96■■□□□ 1.75
AlyrefO08583 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
AlyrefO08583 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
AlyrefO08583 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.94■■□□□ 1.74
AlyrefO08583 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.93■■□□□ 1.74
AlyrefO08583 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.9■■□□□ 1.74
AlyrefO08583 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
AlyrefO08583 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.89■■□□□ 1.74
AlyrefO08583 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
AlyrefO08583 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
AlyrefO08583 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
AlyrefO08583 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
AlyrefO08583 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
AlyrefO08583 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.86■■□□□ 1.73
AlyrefO08583 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
AlyrefO08583 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
AlyrefO08583 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
AlyrefO08583 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
AlyrefO08583 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
AlyrefO08583 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
AlyrefO08583 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
AlyrefO08583 Gm11599-201ENSMUST00000118720 878 ntBASIC25.75■■□□□ 1.71
AlyrefO08583 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
AlyrefO08583 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
AlyrefO08583 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.74■■□□□ 1.71
AlyrefO08583 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
AlyrefO08583 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.73■■□□□ 1.71
AlyrefO08583 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
AlyrefO08583 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.73■■□□□ 1.71
AlyrefO08583 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
AlyrefO08583 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
AlyrefO08583 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
AlyrefO08583 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.71■■□□□ 1.71
AlyrefO08583 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
AlyrefO08583 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
AlyrefO08583 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.69■■□□□ 1.7
AlyrefO08583 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
AlyrefO08583 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
AlyrefO08583 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
AlyrefO08583 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
AlyrefO08583 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.63■■□□□ 1.69
AlyrefO08583 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.62■■□□□ 1.69
AlyrefO08583 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.62■■□□□ 1.69
AlyrefO08583 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
AlyrefO08583 Nkain2-201ENSMUST00000092602 558 ntBASIC25.59■■□□□ 1.69
AlyrefO08583 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.58■■□□□ 1.69
AlyrefO08583 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
AlyrefO08583 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
AlyrefO08583 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
AlyrefO08583 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
AlyrefO08583 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
AlyrefO08583 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
AlyrefO08583 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.54■■□□□ 1.68
AlyrefO08583 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
AlyrefO08583 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.53■■□□□ 1.68
AlyrefO08583 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
AlyrefO08583 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.52■■□□□ 1.68
AlyrefO08583 Mipep-204ENSMUST00000225043 1548 ntBASIC25.52■■□□□ 1.68
AlyrefO08583 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
AlyrefO08583 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
AlyrefO08583 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
AlyrefO08583 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
AlyrefO08583 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
AlyrefO08583 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
AlyrefO08583 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
AlyrefO08583 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
AlyrefO08583 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
AlyrefO08583 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
AlyrefO08583 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
AlyrefO08583 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
AlyrefO08583 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
AlyrefO08583 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
AlyrefO08583 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.44■■□□□ 1.66
AlyrefO08583 Gm22567-201ENSMUST00000175542 342 ntBASIC25.43■■□□□ 1.66
AlyrefO08583 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
AlyrefO08583 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
AlyrefO08583 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
AlyrefO08583 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
AlyrefO08583 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
AlyrefO08583 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
AlyrefO08583 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
AlyrefO08583 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
AlyrefO08583 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
AlyrefO08583 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
AlyrefO08583 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
AlyrefO08583 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
AlyrefO08583 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
AlyrefO08583 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
AlyrefO08583 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms