Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
MsmbO08540 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MsmbO08540 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MsmbO08540 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MsmbO08540 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MsmbO08540 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MsmbO08540 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MsmbO08540 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.5■□□□□ 0.71
MsmbO08540 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MsmbO08540 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MsmbO08540 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.48■□□□□ 0.71
MsmbO08540 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
MsmbO08540 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.47■□□□□ 0.71
MsmbO08540 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MsmbO08540 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MsmbO08540 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MsmbO08540 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MsmbO08540 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MsmbO08540 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MsmbO08540 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MsmbO08540 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MsmbO08540 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MsmbO08540 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MsmbO08540 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MsmbO08540 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.37■□□□□ 0.69
MsmbO08540 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MsmbO08540 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MsmbO08540 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MsmbO08540 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MsmbO08540 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MsmbO08540 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MsmbO08540 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MsmbO08540 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
MsmbO08540 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MsmbO08540 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MsmbO08540 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
MsmbO08540 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
MsmbO08540 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MsmbO08540 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MsmbO08540 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MsmbO08540 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.31■□□□□ 0.68
MsmbO08540 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MsmbO08540 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MsmbO08540 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MsmbO08540 Gm45855-201ENSMUST00000212546 880 ntBASIC19.3■□□□□ 0.68
MsmbO08540 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MsmbO08540 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MsmbO08540 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MsmbO08540 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MsmbO08540 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MsmbO08540 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MsmbO08540 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.27■□□□□ 0.68
MsmbO08540 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MsmbO08540 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MsmbO08540 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.26■□□□□ 0.67
MsmbO08540 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MsmbO08540 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MsmbO08540 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.25■□□□□ 0.67
MsmbO08540 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MsmbO08540 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.24■□□□□ 0.67
MsmbO08540 Gm9397-201ENSMUST00000200125 605 ntBASIC19.24■□□□□ 0.67
MsmbO08540 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MsmbO08540 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
MsmbO08540 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MsmbO08540 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.24■□□□□ 0.67
MsmbO08540 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
MsmbO08540 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MsmbO08540 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MsmbO08540 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MsmbO08540 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MsmbO08540 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.22■□□□□ 0.67
MsmbO08540 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MsmbO08540 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.21■□□□□ 0.67
MsmbO08540 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.21■□□□□ 0.67
MsmbO08540 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
MsmbO08540 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.21■□□□□ 0.67
MsmbO08540 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MsmbO08540 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MsmbO08540 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MsmbO08540 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
MsmbO08540 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MsmbO08540 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MsmbO08540 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.18■□□□□ 0.66
MsmbO08540 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MsmbO08540 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.16■□□□□ 0.66
MsmbO08540 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
MsmbO08540 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MsmbO08540 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MsmbO08540 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.13■□□□□ 0.65
MsmbO08540 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MsmbO08540 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MsmbO08540 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
MsmbO08540 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MsmbO08540 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MsmbO08540 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MsmbO08540 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MsmbO08540 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MsmbO08540 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MsmbO08540 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MsmbO08540 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms