Protein–RNA interactions for Protein: F7BCN9

Gm28038, Predicted gene, 28038 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28038F7BCN9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm28038F7BCN9 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.54■□□□□ 0.56
Gm28038F7BCN9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Gm28038F7BCN9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm28038F7BCN9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm28038F7BCN9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm28038F7BCN9 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.52■□□□□ 0.56
Gm28038F7BCN9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28038F7BCN9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm28038F7BCN9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28038F7BCN9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28038F7BCN9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28038F7BCN9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm28038F7BCN9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.49■□□□□ 0.55
Gm28038F7BCN9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Gm28038F7BCN9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.48■□□□□ 0.55
Gm28038F7BCN9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Gm28038F7BCN9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.46■□□□□ 0.55
Gm28038F7BCN9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm28038F7BCN9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28038F7BCN9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28038F7BCN9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28038F7BCN9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28038F7BCN9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm28038F7BCN9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28038F7BCN9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm28038F7BCN9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.44■□□□□ 0.54
Gm28038F7BCN9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm28038F7BCN9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm28038F7BCN9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm28038F7BCN9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm28038F7BCN9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm28038F7BCN9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm28038F7BCN9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28038F7BCN9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28038F7BCN9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28038F7BCN9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28038F7BCN9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm28038F7BCN9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm28038F7BCN9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm28038F7BCN9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28038F7BCN9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm28038F7BCN9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm28038F7BCN9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Gm28038F7BCN9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm28038F7BCN9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28038F7BCN9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28038F7BCN9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Gm28038F7BCN9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28038F7BCN9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28038F7BCN9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28038F7BCN9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28038F7BCN9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28038F7BCN9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Gm28038F7BCN9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28038F7BCN9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28038F7BCN9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28038F7BCN9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gm28038F7BCN9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28038F7BCN9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28038F7BCN9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.31■□□□□ 0.52
Gm28038F7BCN9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28038F7BCN9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28038F7BCN9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gm28038F7BCN9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28038F7BCN9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.29■□□□□ 0.52
Gm28038F7BCN9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28038F7BCN9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gm28038F7BCN9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm28038F7BCN9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm28038F7BCN9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Gm28038F7BCN9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm28038F7BCN9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28038F7BCN9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28038F7BCN9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28038F7BCN9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28038F7BCN9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28038F7BCN9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm28038F7BCN9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28038F7BCN9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28038F7BCN9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Gm28038F7BCN9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.23■□□□□ 0.51
Gm28038F7BCN9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.22■□□□□ 0.51
Gm28038F7BCN9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28038F7BCN9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28038F7BCN9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm28038F7BCN9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Gm28038F7BCN9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28038F7BCN9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28038F7BCN9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28038F7BCN9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Gm28038F7BCN9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm28038F7BCN9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.19■□□□□ 0.5
Gm28038F7BCN9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm28038F7BCN9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm28038F7BCN9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm28038F7BCN9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm28038F7BCN9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gm28038F7BCN9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.15■□□□□ 0.5
Gm28038F7BCN9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms