Protein–RNA interactions for Protein: F6ZIS7

Rarres1, Retinoic acid receptor responder (tazarotene-induced) 1, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rarres1F6ZIS7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Rarres1F6ZIS7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rarres1F6ZIS7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Rarres1F6ZIS7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rarres1F6ZIS7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rarres1F6ZIS7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rarres1F6ZIS7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rarres1F6ZIS7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rarres1F6ZIS7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rarres1F6ZIS7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rarres1F6ZIS7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.38■■□□□ 1.01
Rarres1F6ZIS7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rarres1F6ZIS7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rarres1F6ZIS7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rarres1F6ZIS7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.36■■□□□ 1.01
Rarres1F6ZIS7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Rarres1F6ZIS7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rarres1F6ZIS7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Rarres1F6ZIS7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.32■■□□□ 1
Rarres1F6ZIS7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rarres1F6ZIS7 Gm25262-201ENSMUST00000174934 133 ntBASIC21.31■■□□□ 1
Rarres1F6ZIS7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Rarres1F6ZIS7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rarres1F6ZIS7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rarres1F6ZIS7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rarres1F6ZIS7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rarres1F6ZIS7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rarres1F6ZIS7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rarres1F6ZIS7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rarres1F6ZIS7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rarres1F6ZIS7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rarres1F6ZIS7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.27■■□□□ 1
Rarres1F6ZIS7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rarres1F6ZIS7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rarres1F6ZIS7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rarres1F6ZIS7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.25■□□□□ 0.99
Rarres1F6ZIS7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rarres1F6ZIS7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rarres1F6ZIS7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rarres1F6ZIS7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.24■□□□□ 0.99
Rarres1F6ZIS7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rarres1F6ZIS7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rarres1F6ZIS7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rarres1F6ZIS7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rarres1F6ZIS7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rarres1F6ZIS7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.2■□□□□ 0.98
Rarres1F6ZIS7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rarres1F6ZIS7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rarres1F6ZIS7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rarres1F6ZIS7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rarres1F6ZIS7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rarres1F6ZIS7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.17■□□□□ 0.98
Rarres1F6ZIS7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rarres1F6ZIS7 Mipep-204ENSMUST00000225043 1548 ntBASIC21.17■□□□□ 0.98
Rarres1F6ZIS7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rarres1F6ZIS7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rarres1F6ZIS7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rarres1F6ZIS7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rarres1F6ZIS7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rarres1F6ZIS7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rarres1F6ZIS7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rarres1F6ZIS7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.13■□□□□ 0.97
Rarres1F6ZIS7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rarres1F6ZIS7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rarres1F6ZIS7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rarres1F6ZIS7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rarres1F6ZIS7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rarres1F6ZIS7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rarres1F6ZIS7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rarres1F6ZIS7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rarres1F6ZIS7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.09■□□□□ 0.97
Rarres1F6ZIS7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rarres1F6ZIS7 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rarres1F6ZIS7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rarres1F6ZIS7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rarres1F6ZIS7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rarres1F6ZIS7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rarres1F6ZIS7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rarres1F6ZIS7 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.05■□□□□ 0.96
Rarres1F6ZIS7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rarres1F6ZIS7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rarres1F6ZIS7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rarres1F6ZIS7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rarres1F6ZIS7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.03■□□□□ 0.96
Rarres1F6ZIS7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Rarres1F6ZIS7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rarres1F6ZIS7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rarres1F6ZIS7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rarres1F6ZIS7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rarres1F6ZIS7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rarres1F6ZIS7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Rarres1F6ZIS7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rarres1F6ZIS7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rarres1F6ZIS7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rarres1F6ZIS7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rarres1F6ZIS7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rarres1F6ZIS7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rarres1F6ZIS7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rarres1F6ZIS7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rarres1F6ZIS7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms