Protein–RNA interactions for Protein: E9Q236

Abcc4, ATP-binding cassette, sub-family C (CFTR/MRP), member 4, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcc4E9Q236 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Abcc4E9Q236 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Abcc4E9Q236 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Abcc4E9Q236 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
Abcc4E9Q236 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Abcc4E9Q236 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Abcc4E9Q236 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Abcc4E9Q236 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
Abcc4E9Q236 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.3■■■□□ 2.6
Abcc4E9Q236 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Abcc4E9Q236 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Abcc4E9Q236 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Abcc4E9Q236 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.28■■■□□ 2.6
Abcc4E9Q236 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Abcc4E9Q236 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.27■■■□□ 2.6
Abcc4E9Q236 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
Abcc4E9Q236 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
Abcc4E9Q236 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Abcc4E9Q236 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Abcc4E9Q236 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Abcc4E9Q236 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Abcc4E9Q236 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Abcc4E9Q236 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Abcc4E9Q236 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Abcc4E9Q236 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Abcc4E9Q236 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.2■■■□□ 2.59
Abcc4E9Q236 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Abcc4E9Q236 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
Abcc4E9Q236 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Abcc4E9Q236 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.17■■■□□ 2.58
Abcc4E9Q236 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Abcc4E9Q236 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Abcc4E9Q236 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Abcc4E9Q236 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.13■■■□□ 2.57
Abcc4E9Q236 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Abcc4E9Q236 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Abcc4E9Q236 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Abcc4E9Q236 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.1■■■□□ 2.57
Abcc4E9Q236 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Abcc4E9Q236 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Abcc4E9Q236 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Abcc4E9Q236 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.04■■■□□ 2.56
Abcc4E9Q236 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Abcc4E9Q236 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Abcc4E9Q236 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
Abcc4E9Q236 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Abcc4E9Q236 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Abcc4E9Q236 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
Abcc4E9Q236 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Abcc4E9Q236 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Abcc4E9Q236 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.99■■■□□ 2.55
Abcc4E9Q236 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Abcc4E9Q236 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Abcc4E9Q236 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Abcc4E9Q236 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Abcc4E9Q236 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.92■■■□□ 2.54
Abcc4E9Q236 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Abcc4E9Q236 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Abcc4E9Q236 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Abcc4E9Q236 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.91■■■□□ 2.54
Abcc4E9Q236 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.91■■■□□ 2.54
Abcc4E9Q236 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Abcc4E9Q236 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
Abcc4E9Q236 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Abcc4E9Q236 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.9■■■□□ 2.54
Abcc4E9Q236 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Abcc4E9Q236 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.89■■■□□ 2.54
Abcc4E9Q236 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Abcc4E9Q236 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.89■■■□□ 2.54
Abcc4E9Q236 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.89■■■□□ 2.54
Abcc4E9Q236 Gm9397-201ENSMUST00000200125 605 ntBASIC30.88■■■□□ 2.53
Abcc4E9Q236 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Abcc4E9Q236 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Abcc4E9Q236 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Abcc4E9Q236 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Abcc4E9Q236 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Abcc4E9Q236 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.81■■■□□ 2.52
Abcc4E9Q236 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.81■■■□□ 2.52
Abcc4E9Q236 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Abcc4E9Q236 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.8■■■□□ 2.52
Abcc4E9Q236 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Abcc4E9Q236 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Abcc4E9Q236 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Abcc4E9Q236 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Abcc4E9Q236 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Abcc4E9Q236 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Abcc4E9Q236 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
Abcc4E9Q236 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Abcc4E9Q236 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Abcc4E9Q236 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Abcc4E9Q236 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
Abcc4E9Q236 Gm45855-201ENSMUST00000212546 880 ntBASIC30.73■■■□□ 2.51
Abcc4E9Q236 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Abcc4E9Q236 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Abcc4E9Q236 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.71■■■□□ 2.51
Abcc4E9Q236 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.7■■■□□ 2.51
Abcc4E9Q236 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Abcc4E9Q236 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Abcc4E9Q236 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Abcc4E9Q236 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms