Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdh17E9PXF0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh17E9PXF0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.62■■□□□ 1.37
Pcdh17E9PXF0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
Pcdh17E9PXF0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Pcdh17E9PXF0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdh17E9PXF0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
Pcdh17E9PXF0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.6■■□□□ 1.37
Pcdh17E9PXF0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdh17E9PXF0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdh17E9PXF0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdh17E9PXF0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Pcdh17E9PXF0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.59■■□□□ 1.37
Pcdh17E9PXF0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh17E9PXF0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.58■■□□□ 1.36
Pcdh17E9PXF0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh17E9PXF0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh17E9PXF0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh17E9PXF0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.56■■□□□ 1.36
Pcdh17E9PXF0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh17E9PXF0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh17E9PXF0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh17E9PXF0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh17E9PXF0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.54■■□□□ 1.36
Pcdh17E9PXF0 Gm24970-201ENSMUST00000175582 82 ntBASIC23.53■■□□□ 1.36
Pcdh17E9PXF0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.53■■□□□ 1.36
Pcdh17E9PXF0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh17E9PXF0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh17E9PXF0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh17E9PXF0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh17E9PXF0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh17E9PXF0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdh17E9PXF0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.5■■□□□ 1.35
Pcdh17E9PXF0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdh17E9PXF0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Pcdh17E9PXF0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh17E9PXF0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdh17E9PXF0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdh17E9PXF0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdh17E9PXF0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdh17E9PXF0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Pcdh17E9PXF0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdh17E9PXF0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdh17E9PXF0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdh17E9PXF0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Pcdh17E9PXF0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdh17E9PXF0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.41■■□□□ 1.34
Pcdh17E9PXF0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdh17E9PXF0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.4■■□□□ 1.34
Pcdh17E9PXF0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Pcdh17E9PXF0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdh17E9PXF0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdh17E9PXF0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdh17E9PXF0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.38■■□□□ 1.33
Pcdh17E9PXF0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.38■■□□□ 1.33
Pcdh17E9PXF0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdh17E9PXF0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Pcdh17E9PXF0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdh17E9PXF0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdh17E9PXF0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdh17E9PXF0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdh17E9PXF0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh17E9PXF0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh17E9PXF0 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.32■■□□□ 1.32
Pcdh17E9PXF0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh17E9PXF0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdh17E9PXF0 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.3■■□□□ 1.32
Pcdh17E9PXF0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdh17E9PXF0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdh17E9PXF0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdh17E9PXF0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.28■■□□□ 1.32
Pcdh17E9PXF0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdh17E9PXF0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdh17E9PXF0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh17E9PXF0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh17E9PXF0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Pcdh17E9PXF0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh17E9PXF0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh17E9PXF0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh17E9PXF0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh17E9PXF0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh17E9PXF0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.22■■□□□ 1.31
Pcdh17E9PXF0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Pcdh17E9PXF0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdh17E9PXF0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdh17E9PXF0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Pcdh17E9PXF0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Pcdh17E9PXF0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh17E9PXF0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh17E9PXF0 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.16■■□□□ 1.3
Pcdh17E9PXF0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh17E9PXF0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.13■■□□□ 1.29
Pcdh17E9PXF0 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.13■■□□□ 1.29
Pcdh17E9PXF0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh17E9PXF0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Pcdh17E9PXF0 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.13■■□□□ 1.29
Pcdh17E9PXF0 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.12■■□□□ 1.29
Pcdh17E9PXF0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdh17E9PXF0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Pcdh17E9PXF0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms