Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5878E9PUB3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Gm5878E9PUB3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Gm5878E9PUB3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Gm5878E9PUB3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Gm5878E9PUB3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Gm5878E9PUB3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Gm5878E9PUB3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Gm5878E9PUB3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Gm5878E9PUB3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Gm5878E9PUB3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Gm5878E9PUB3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm5878E9PUB3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Gm5878E9PUB3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm5878E9PUB3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm5878E9PUB3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm5878E9PUB3 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.02■□□□□ 0.64
Gm5878E9PUB3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm5878E9PUB3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm5878E9PUB3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm5878E9PUB3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Gm5878E9PUB3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm5878E9PUB3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm5878E9PUB3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5878E9PUB3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.98■□□□□ 0.63
Gm5878E9PUB3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.98■□□□□ 0.63
Gm5878E9PUB3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gm5878E9PUB3 Gm26115-201ENSMUST00000175605 87 ntBASIC18.98■□□□□ 0.63
Gm5878E9PUB3 Peli2-204ENSMUST00000226513 1320 ntBASIC18.98■□□□□ 0.63
Gm5878E9PUB3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm5878E9PUB3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm5878E9PUB3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm5878E9PUB3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm5878E9PUB3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm5878E9PUB3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm5878E9PUB3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm5878E9PUB3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.95■□□□□ 0.62
Gm5878E9PUB3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm5878E9PUB3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm5878E9PUB3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Gm5878E9PUB3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm5878E9PUB3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm5878E9PUB3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm5878E9PUB3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm5878E9PUB3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
Gm5878E9PUB3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.92■□□□□ 0.62
Gm5878E9PUB3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Gm5878E9PUB3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Gm5878E9PUB3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm5878E9PUB3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm5878E9PUB3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm5878E9PUB3 Gm8109-201ENSMUST00000194076 746 ntBASIC18.9■□□□□ 0.62
Gm5878E9PUB3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm5878E9PUB3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm5878E9PUB3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5878E9PUB3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5878E9PUB3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Gm5878E9PUB3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm5878E9PUB3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm5878E9PUB3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm5878E9PUB3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.88■□□□□ 0.61
Gm5878E9PUB3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm5878E9PUB3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm5878E9PUB3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Gm5878E9PUB3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm5878E9PUB3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm5878E9PUB3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.83■□□□□ 0.6
Gm5878E9PUB3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5878E9PUB3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm5878E9PUB3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm5878E9PUB3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Gm5878E9PUB3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm5878E9PUB3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5878E9PUB3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5878E9PUB3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm5878E9PUB3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gm5878E9PUB3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm5878E9PUB3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5878E9PUB3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm5878E9PUB3 Amer2-203ENSMUST00000225247 2662 ntBASIC18.77■□□□□ 0.6
Gm5878E9PUB3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5878E9PUB3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5878E9PUB3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm5878E9PUB3 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.76■□□□□ 0.59
Gm5878E9PUB3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm5878E9PUB3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gm5878E9PUB3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5878E9PUB3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm5878E9PUB3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gm5878E9PUB3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm5878E9PUB3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm5878E9PUB3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5878E9PUB3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm5878E9PUB3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm5878E9PUB3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm5878E9PUB3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm5878E9PUB3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm5878E9PUB3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Gm5878E9PUB3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm5878E9PUB3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms