Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Ptchd4B9EKX1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Ptchd4B9EKX1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.97■■■□□ 2.07
Ptchd4B9EKX1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Ptchd4B9EKX1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ptchd4B9EKX1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
Ptchd4B9EKX1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ptchd4B9EKX1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.95■■■□□ 2.06
Ptchd4B9EKX1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ptchd4B9EKX1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ptchd4B9EKX1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ptchd4B9EKX1 Gm24970-201ENSMUST00000175582 82 ntBASIC27.92■■■□□ 2.06
Ptchd4B9EKX1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ptchd4B9EKX1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Ptchd4B9EKX1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.91■■■□□ 2.06
Ptchd4B9EKX1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ptchd4B9EKX1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ptchd4B9EKX1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Ptchd4B9EKX1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ptchd4B9EKX1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Ptchd4B9EKX1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ptchd4B9EKX1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ptchd4B9EKX1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.85■■■□□ 2.05
Ptchd4B9EKX1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
Ptchd4B9EKX1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ptchd4B9EKX1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ptchd4B9EKX1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ptchd4B9EKX1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.82■■■□□ 2.04
Ptchd4B9EKX1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ptchd4B9EKX1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ptchd4B9EKX1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Ptchd4B9EKX1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Ptchd4B9EKX1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Ptchd4B9EKX1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Ptchd4B9EKX1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.8■■■□□ 2.04
Ptchd4B9EKX1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
Ptchd4B9EKX1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.77■■■□□ 2.04
Ptchd4B9EKX1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Ptchd4B9EKX1 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.75■■■□□ 2.03
Ptchd4B9EKX1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ptchd4B9EKX1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Ptchd4B9EKX1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ptchd4B9EKX1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ptchd4B9EKX1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.72■■■□□ 2.03
Ptchd4B9EKX1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ptchd4B9EKX1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ptchd4B9EKX1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ptchd4B9EKX1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ptchd4B9EKX1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ptchd4B9EKX1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ptchd4B9EKX1 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.66■■■□□ 2.02
Ptchd4B9EKX1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ptchd4B9EKX1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ptchd4B9EKX1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Ptchd4B9EKX1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Ptchd4B9EKX1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ptchd4B9EKX1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Ptchd4B9EKX1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ptchd4B9EKX1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Ptchd4B9EKX1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
Ptchd4B9EKX1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ptchd4B9EKX1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27.59■■■□□ 2.01
Ptchd4B9EKX1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27.59■■■□□ 2.01
Ptchd4B9EKX1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Ptchd4B9EKX1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.56■■■□□ 2
Ptchd4B9EKX1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.54■■■□□ 2
Ptchd4B9EKX1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.54■■■□□ 2
Ptchd4B9EKX1 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.53■■■□□ 2
Ptchd4B9EKX1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ptchd4B9EKX1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Ptchd4B9EKX1 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.5■■□□□ 1.99
Ptchd4B9EKX1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Ptchd4B9EKX1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ptchd4B9EKX1 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.48■■□□□ 1.99
Ptchd4B9EKX1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Ptchd4B9EKX1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
Ptchd4B9EKX1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ptchd4B9EKX1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Ptchd4B9EKX1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.46■■□□□ 1.99
Ptchd4B9EKX1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Ptchd4B9EKX1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Ptchd4B9EKX1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Ptchd4B9EKX1 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.42■■□□□ 1.98
Ptchd4B9EKX1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.4■■□□□ 1.98
Ptchd4B9EKX1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ptchd4B9EKX1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Ptchd4B9EKX1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ptchd4B9EKX1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ptchd4B9EKX1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Ptchd4B9EKX1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.37■■□□□ 1.97
Ptchd4B9EKX1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ptchd4B9EKX1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Ptchd4B9EKX1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Ptchd4B9EKX1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ptchd4B9EKX1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Ptchd4B9EKX1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ptchd4B9EKX1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Ptchd4B9EKX1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ptchd4B9EKX1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ptchd4B9EKX1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms