Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.93
Mindy4b-psA0A1W2P7H6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Mindy4b-psA0A1W2P7H6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Mindy4b-psA0A1W2P7H6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Mindy4b-psA0A1W2P7H6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Mindy4b-psA0A1W2P7H6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Mindy4b-psA0A1W2P7H6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Mindy4b-psA0A1W2P7H6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Mindy4b-psA0A1W2P7H6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Mindy4b-psA0A1W2P7H6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Mindy4b-psA0A1W2P7H6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.03■■□□□ 1.92
Mindy4b-psA0A1W2P7H6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Mindy4b-psA0A1W2P7H6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Mindy4b-psA0A1W2P7H6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Mindy4b-psA0A1W2P7H6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
Mindy4b-psA0A1W2P7H6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Mindy4b-psA0A1W2P7H6 Tdp2-203ENSMUST00000223804 1136 ntBASIC27■■□□□ 1.91
Mindy4b-psA0A1W2P7H6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Mindy4b-psA0A1W2P7H6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Mindy4b-psA0A1W2P7H6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Mindy4b-psA0A1W2P7H6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Mindy4b-psA0A1W2P7H6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Mindy4b-psA0A1W2P7H6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Mindy4b-psA0A1W2P7H6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Mindy4b-psA0A1W2P7H6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Mindy4b-psA0A1W2P7H6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Mindy4b-psA0A1W2P7H6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Mindy4b-psA0A1W2P7H6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Mindy4b-psA0A1W2P7H6 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.88■■□□□ 1.89
Mindy4b-psA0A1W2P7H6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Mindy4b-psA0A1W2P7H6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.87■■□□□ 1.89
Mindy4b-psA0A1W2P7H6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Mindy4b-psA0A1W2P7H6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Mindy4b-psA0A1W2P7H6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Mindy4b-psA0A1W2P7H6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
Mindy4b-psA0A1W2P7H6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Mindy4b-psA0A1W2P7H6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Mindy4b-psA0A1W2P7H6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Mindy4b-psA0A1W2P7H6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Mindy4b-psA0A1W2P7H6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Mindy4b-psA0A1W2P7H6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Mindy4b-psA0A1W2P7H6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.8■■□□□ 1.88
Mindy4b-psA0A1W2P7H6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Mindy4b-psA0A1W2P7H6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Mindy4b-psA0A1W2P7H6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.77■■□□□ 1.88
Mindy4b-psA0A1W2P7H6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 Gm9397-201ENSMUST00000200125 605 ntBASIC26.76■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.76■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.76■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 Gm45855-201ENSMUST00000212546 880 ntBASIC26.75■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.74■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.73■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.73■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Mindy4b-psA0A1W2P7H6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Mindy4b-psA0A1W2P7H6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.69■■□□□ 1.86
Mindy4b-psA0A1W2P7H6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Mindy4b-psA0A1W2P7H6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Mindy4b-psA0A1W2P7H6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Mindy4b-psA0A1W2P7H6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Mindy4b-psA0A1W2P7H6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Mindy4b-psA0A1W2P7H6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
Mindy4b-psA0A1W2P7H6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.64■■□□□ 1.86
Mindy4b-psA0A1W2P7H6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Mindy4b-psA0A1W2P7H6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Mindy4b-psA0A1W2P7H6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Mindy4b-psA0A1W2P7H6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Mindy4b-psA0A1W2P7H6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Mindy4b-psA0A1W2P7H6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Mindy4b-psA0A1W2P7H6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Mindy4b-psA0A1W2P7H6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Mindy4b-psA0A1W2P7H6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Mindy4b-psA0A1W2P7H6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Mindy4b-psA0A1W2P7H6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Mindy4b-psA0A1W2P7H6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.57■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.57■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.57■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Gm24970-201ENSMUST00000175582 82 ntBASIC26.56■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.56■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.54■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Mindy4b-psA0A1W2P7H6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.51■■□□□ 1.83
Mindy4b-psA0A1W2P7H6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Mindy4b-psA0A1W2P7H6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms