Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv13-2A0A140T8N6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv13-2A0A140T8N6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv13-2A0A140T8N6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.59■□□□□ 0.41
Trbv13-2A0A140T8N6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv13-2A0A140T8N6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv13-2A0A140T8N6 Gm16148-201ENSMUST00000119653 893 ntBASIC17.58■□□□□ 0.4
Trbv13-2A0A140T8N6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv13-2A0A140T8N6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv13-2A0A140T8N6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv13-2A0A140T8N6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv13-2A0A140T8N6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv13-2A0A140T8N6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.56■□□□□ 0.4
Trbv13-2A0A140T8N6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv13-2A0A140T8N6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv13-2A0A140T8N6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.54■□□□□ 0.4
Trbv13-2A0A140T8N6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv13-2A0A140T8N6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv13-2A0A140T8N6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Trbv13-2A0A140T8N6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv13-2A0A140T8N6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trbv13-2A0A140T8N6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trbv13-2A0A140T8N6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC17.48■□□□□ 0.39
Trbv13-2A0A140T8N6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trbv13-2A0A140T8N6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trbv13-2A0A140T8N6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv13-2A0A140T8N6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv13-2A0A140T8N6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trbv13-2A0A140T8N6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trbv13-2A0A140T8N6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbv13-2A0A140T8N6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trbv13-2A0A140T8N6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv13-2A0A140T8N6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbv13-2A0A140T8N6 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.44■□□□□ 0.38
Trbv13-2A0A140T8N6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbv13-2A0A140T8N6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbv13-2A0A140T8N6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trbv13-2A0A140T8N6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trbv13-2A0A140T8N6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trbv13-2A0A140T8N6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv13-2A0A140T8N6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv13-2A0A140T8N6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Trbv13-2A0A140T8N6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv13-2A0A140T8N6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.39■□□□□ 0.37
Trbv13-2A0A140T8N6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Trbv13-2A0A140T8N6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv13-2A0A140T8N6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv13-2A0A140T8N6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv13-2A0A140T8N6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv13-2A0A140T8N6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv13-2A0A140T8N6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv13-2A0A140T8N6 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.36■□□□□ 0.37
Trbv13-2A0A140T8N6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv13-2A0A140T8N6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trbv13-2A0A140T8N6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trbv13-2A0A140T8N6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv13-2A0A140T8N6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trbv13-2A0A140T8N6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv13-2A0A140T8N6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trbv13-2A0A140T8N6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv13-2A0A140T8N6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trbv13-2A0A140T8N6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv13-2A0A140T8N6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv13-2A0A140T8N6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv13-2A0A140T8N6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv13-2A0A140T8N6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv13-2A0A140T8N6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv13-2A0A140T8N6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv13-2A0A140T8N6 Zxda-201ENSMUST00000117281 2621 ntBASIC17.31■□□□□ 0.36
Trbv13-2A0A140T8N6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv13-2A0A140T8N6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv13-2A0A140T8N6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Trbv13-2A0A140T8N6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trbv13-2A0A140T8N6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.3■□□□□ 0.36
Trbv13-2A0A140T8N6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv13-2A0A140T8N6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv13-2A0A140T8N6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trbv13-2A0A140T8N6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv13-2A0A140T8N6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv13-2A0A140T8N6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv13-2A0A140T8N6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv13-2A0A140T8N6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trbv13-2A0A140T8N6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv13-2A0A140T8N6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv13-2A0A140T8N6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv13-2A0A140T8N6 Zfp131-205ENSMUST00000223812 663 ntBASIC17.23■□□□□ 0.35
Trbv13-2A0A140T8N6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv13-2A0A140T8N6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trbv13-2A0A140T8N6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv13-2A0A140T8N6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv13-2A0A140T8N6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv13-2A0A140T8N6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trbv13-2A0A140T8N6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv13-2A0A140T8N6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trbv13-2A0A140T8N6 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.2■□□□□ 0.34
Trbv13-2A0A140T8N6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv13-2A0A140T8N6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv13-2A0A140T8N6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trbv13-2A0A140T8N6 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.19■□□□□ 0.34
Trbv13-2A0A140T8N6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms