Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-52A0A0A6YXC3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-52A0A0A6YXC3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ighv1-52A0A0A6YXC3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-52A0A0A6YXC3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Ighv1-52A0A0A6YXC3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Ighv1-52A0A0A6YXC3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-52A0A0A6YXC3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-52A0A0A6YXC3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-52A0A0A6YXC3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ighv1-52A0A0A6YXC3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-52A0A0A6YXC3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-52A0A0A6YXC3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ighv1-52A0A0A6YXC3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Zfp131-205ENSMUST00000223812 663 ntBASIC19.26■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.25■□□□□ 0.67
Ighv1-52A0A0A6YXC3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.25■□□□□ 0.67
Ighv1-52A0A0A6YXC3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.25■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-52A0A0A6YXC3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ighv1-52A0A0A6YXC3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-52A0A0A6YXC3 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.2■□□□□ 0.66
Ighv1-52A0A0A6YXC3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-52A0A0A6YXC3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ighv1-52A0A0A6YXC3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ighv1-52A0A0A6YXC3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-52A0A0A6YXC3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-52A0A0A6YXC3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-52A0A0A6YXC3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-52A0A0A6YXC3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Ighv1-52A0A0A6YXC3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.14■□□□□ 0.66
Ighv1-52A0A0A6YXC3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-52A0A0A6YXC3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.14■□□□□ 0.65
Ighv1-52A0A0A6YXC3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-52A0A0A6YXC3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-52A0A0A6YXC3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-52A0A0A6YXC3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ighv1-52A0A0A6YXC3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.12■□□□□ 0.65
Ighv1-52A0A0A6YXC3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-52A0A0A6YXC3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-52A0A0A6YXC3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Ighv1-52A0A0A6YXC3 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.09■□□□□ 0.65
Ighv1-52A0A0A6YXC3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ighv1-52A0A0A6YXC3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.08■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.08■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.06■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.04■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ighv1-52A0A0A6YXC3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-52A0A0A6YXC3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.97■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-52A0A0A6YXC3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Ighv1-52A0A0A6YXC3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.94■□□□□ 0.62
Ighv1-52A0A0A6YXC3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Gm9397-201ENSMUST00000200125 605 ntBASIC18.93■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-52A0A0A6YXC3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms