Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav13-4-dv7A0A075B6C2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Trav13-4-dv7A0A075B6C2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.13■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.13■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav13-4-dv7A0A075B6C2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 AC166822.3-201ENSMUST00000227394 661 ntBASIC17.08■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Gm27322-201ENSMUST00000184007 104 ntBASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.02■□□□□ 0.32
Trav13-4-dv7A0A075B6C2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.98■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trav13-4-dv7A0A075B6C2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.96■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.9■□□□□ 0.3
Trav13-4-dv7A0A075B6C2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13-4-dv7A0A075B6C2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms