Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav8-1A0A075B641 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.89■□□□□ 0.45
Trav8-1A0A075B641 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trav8-1A0A075B641 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav8-1A0A075B641 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Trav8-1A0A075B641 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav8-1A0A075B641 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav8-1A0A075B641 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.87■□□□□ 0.45
Trav8-1A0A075B641 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8-1A0A075B641 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8-1A0A075B641 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8-1A0A075B641 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8-1A0A075B641 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8-1A0A075B641 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8-1A0A075B641 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav8-1A0A075B641 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8-1A0A075B641 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8-1A0A075B641 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav8-1A0A075B641 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Trav8-1A0A075B641 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8-1A0A075B641 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8-1A0A075B641 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.84■□□□□ 0.45
Trav8-1A0A075B641 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav8-1A0A075B641 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav8-1A0A075B641 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav8-1A0A075B641 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.83■□□□□ 0.45
Trav8-1A0A075B641 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav8-1A0A075B641 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Trav8-1A0A075B641 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav8-1A0A075B641 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8-1A0A075B641 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8-1A0A075B641 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8-1A0A075B641 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav8-1A0A075B641 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav8-1A0A075B641 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.8■□□□□ 0.44
Trav8-1A0A075B641 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8-1A0A075B641 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8-1A0A075B641 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.8■□□□□ 0.44
Trav8-1A0A075B641 Gm25238-201ENSMUST00000174914 89 ntBASIC17.8■□□□□ 0.44
Trav8-1A0A075B641 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav8-1A0A075B641 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8-1A0A075B641 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8-1A0A075B641 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8-1A0A075B641 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav8-1A0A075B641 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav8-1A0A075B641 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.78■□□□□ 0.44
Trav8-1A0A075B641 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav8-1A0A075B641 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC17.77■□□□□ 0.43
Trav8-1A0A075B641 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav8-1A0A075B641 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav8-1A0A075B641 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8-1A0A075B641 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8-1A0A075B641 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav8-1A0A075B641 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8-1A0A075B641 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8-1A0A075B641 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trav8-1A0A075B641 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav8-1A0A075B641 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8-1A0A075B641 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8-1A0A075B641 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Trav8-1A0A075B641 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav8-1A0A075B641 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav8-1A0A075B641 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav8-1A0A075B641 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8-1A0A075B641 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav8-1A0A075B641 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8-1A0A075B641 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav8-1A0A075B641 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav8-1A0A075B641 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Trav8-1A0A075B641 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav8-1A0A075B641 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav8-1A0A075B641 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav8-1A0A075B641 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav8-1A0A075B641 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav8-1A0A075B641 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav8-1A0A075B641 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav8-1A0A075B641 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav8-1A0A075B641 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav8-1A0A075B641 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8-1A0A075B641 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav8-1A0A075B641 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav8-1A0A075B641 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav8-1A0A075B641 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav8-1A0A075B641 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav8-1A0A075B641 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav8-1A0A075B641 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav8-1A0A075B641 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav8-1A0A075B641 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav8-1A0A075B641 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8-1A0A075B641 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8-1A0A075B641 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8-1A0A075B641 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8-1A0A075B641 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav8-1A0A075B641 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav8-1A0A075B641 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8-1A0A075B641 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8-1A0A075B641 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav8-1A0A075B641 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav8-1A0A075B641 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Trav8-1A0A075B641 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms