Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Zfp131-205ENSMUST00000223812 663 ntBASIC22.98■■□□□ 1.27
Trav12n-2A0A075B626 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trav12n-2A0A075B626 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
Trav12n-2A0A075B626 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trav12n-2A0A075B626 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trav12n-2A0A075B626 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trav12n-2A0A075B626 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trav12n-2A0A075B626 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trav12n-2A0A075B626 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Trav12n-2A0A075B626 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.93■■□□□ 1.26
Trav12n-2A0A075B626 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Trav12n-2A0A075B626 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Trav12n-2A0A075B626 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Trav12n-2A0A075B626 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trav12n-2A0A075B626 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Trav12n-2A0A075B626 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Trav12n-2A0A075B626 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.91■■□□□ 1.26
Trav12n-2A0A075B626 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trav12n-2A0A075B626 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Trav12n-2A0A075B626 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.89■■□□□ 1.26
Trav12n-2A0A075B626 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Trav12n-2A0A075B626 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Trav12n-2A0A075B626 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Trav12n-2A0A075B626 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Trav12n-2A0A075B626 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trav12n-2A0A075B626 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trav12n-2A0A075B626 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trav12n-2A0A075B626 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.87■■□□□ 1.25
Trav12n-2A0A075B626 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trav12n-2A0A075B626 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Trav12n-2A0A075B626 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Trav12n-2A0A075B626 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Trav12n-2A0A075B626 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trav12n-2A0A075B626 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.83■■□□□ 1.25
Trav12n-2A0A075B626 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Trav12n-2A0A075B626 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Trav12n-2A0A075B626 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.82■■□□□ 1.24
Trav12n-2A0A075B626 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trav12n-2A0A075B626 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trav12n-2A0A075B626 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Trav12n-2A0A075B626 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Trav12n-2A0A075B626 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trav12n-2A0A075B626 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.78■■□□□ 1.24
Trav12n-2A0A075B626 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trav12n-2A0A075B626 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.77■■□□□ 1.24
Trav12n-2A0A075B626 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.77■■□□□ 1.24
Trav12n-2A0A075B626 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Trav12n-2A0A075B626 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Trav12n-2A0A075B626 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trav12n-2A0A075B626 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trav12n-2A0A075B626 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trav12n-2A0A075B626 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trav12n-2A0A075B626 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trav12n-2A0A075B626 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.71■■□□□ 1.23
Trav12n-2A0A075B626 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
Trav12n-2A0A075B626 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.7■■□□□ 1.22
Trav12n-2A0A075B626 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trav12n-2A0A075B626 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trav12n-2A0A075B626 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trav12n-2A0A075B626 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trav12n-2A0A075B626 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trav12n-2A0A075B626 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trav12n-2A0A075B626 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Trav12n-2A0A075B626 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.66■■□□□ 1.22
Trav12n-2A0A075B626 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trav12n-2A0A075B626 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.65■■□□□ 1.22
Trav12n-2A0A075B626 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trav12n-2A0A075B626 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trav12n-2A0A075B626 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trav12n-2A0A075B626 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trav12n-2A0A075B626 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trav12n-2A0A075B626 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trav12n-2A0A075B626 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Trav12n-2A0A075B626 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trav12n-2A0A075B626 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trav12n-2A0A075B626 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trav12n-2A0A075B626 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trav12n-2A0A075B626 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.59■■□□□ 1.21
Trav12n-2A0A075B626 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trav12n-2A0A075B626 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trav12n-2A0A075B626 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trav12n-2A0A075B626 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trav12n-2A0A075B626 Gm9397-201ENSMUST00000200125 605 ntBASIC22.56■■□□□ 1.2
Trav12n-2A0A075B626 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
Trav12n-2A0A075B626 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trav12n-2A0A075B626 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trav12n-2A0A075B626 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trav12n-2A0A075B626 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Trav12n-2A0A075B626 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.54■■□□□ 1.2
Trav12n-2A0A075B626 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trav12n-2A0A075B626 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Trav12n-2A0A075B626 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Trav12n-2A0A075B626 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.51■■□□□ 1.19
Trav12n-2A0A075B626 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trav12n-2A0A075B626 Gm45855-201ENSMUST00000212546 880 ntBASIC22.5■■□□□ 1.19
Trav12n-2A0A075B626 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trav12n-2A0A075B626 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trav12n-2A0A075B626 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trav12n-2A0A075B626 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.49■■□□□ 1.19
Trav12n-2A0A075B626 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms