Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4n-4A0A075B615 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4n-4A0A075B615 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav4n-4A0A075B615 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4n-4A0A075B615 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav4n-4A0A075B615 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4n-4A0A075B615 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4n-4A0A075B615 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav4n-4A0A075B615 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trav4n-4A0A075B615 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav4n-4A0A075B615 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav4n-4A0A075B615 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4n-4A0A075B615 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4n-4A0A075B615 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4n-4A0A075B615 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav4n-4A0A075B615 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav4n-4A0A075B615 Gm27325-201ENSMUST00000175467 74 ntBASIC17.47■□□□□ 0.39
Trav4n-4A0A075B615 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav4n-4A0A075B615 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav4n-4A0A075B615 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav4n-4A0A075B615 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.43■□□□□ 0.38
Trav4n-4A0A075B615 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav4n-4A0A075B615 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4n-4A0A075B615 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4n-4A0A075B615 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4n-4A0A075B615 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav4n-4A0A075B615 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4n-4A0A075B615 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav4n-4A0A075B615 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav4n-4A0A075B615 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav4n-4A0A075B615 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Trav4n-4A0A075B615 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4n-4A0A075B615 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4n-4A0A075B615 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.39■□□□□ 0.38
Trav4n-4A0A075B615 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav4n-4A0A075B615 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4n-4A0A075B615 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav4n-4A0A075B615 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.37■□□□□ 0.37
Trav4n-4A0A075B615 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav4n-4A0A075B615 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav4n-4A0A075B615 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav4n-4A0A075B615 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav4n-4A0A075B615 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav4n-4A0A075B615 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav4n-4A0A075B615 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.35■□□□□ 0.37
Trav4n-4A0A075B615 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav4n-4A0A075B615 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav4n-4A0A075B615 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav4n-4A0A075B615 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav4n-4A0A075B615 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav4n-4A0A075B615 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav4n-4A0A075B615 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav4n-4A0A075B615 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav4n-4A0A075B615 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav4n-4A0A075B615 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav4n-4A0A075B615 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav4n-4A0A075B615 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav4n-4A0A075B615 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav4n-4A0A075B615 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav4n-4A0A075B615 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav4n-4A0A075B615 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav4n-4A0A075B615 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav4n-4A0A075B615 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav4n-4A0A075B615 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.28■□□□□ 0.36
Trav4n-4A0A075B615 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav4n-4A0A075B615 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4n-4A0A075B615 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav4n-4A0A075B615 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav4n-4A0A075B615 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav4n-4A0A075B615 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav4n-4A0A075B615 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4n-4A0A075B615 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4n-4A0A075B615 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4n-4A0A075B615 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav4n-4A0A075B615 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Trav4n-4A0A075B615 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav4n-4A0A075B615 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Trav4n-4A0A075B615 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav4n-4A0A075B615 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav4n-4A0A075B615 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav4n-4A0A075B615 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav4n-4A0A075B615 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav4n-4A0A075B615 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.22■□□□□ 0.35
Trav4n-4A0A075B615 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav4n-4A0A075B615 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav4n-4A0A075B615 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav4n-4A0A075B615 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav4n-4A0A075B615 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav4n-4A0A075B615 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav4n-4A0A075B615 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav4n-4A0A075B615 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav4n-4A0A075B615 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav4n-4A0A075B615 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav4n-4A0A075B615 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav4n-4A0A075B615 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav4n-4A0A075B615 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav4n-4A0A075B615 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav4n-4A0A075B615 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav4n-4A0A075B615 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav4n-4A0A075B615 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms