Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv1-55A0A075B5W6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-55A0A075B5W6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-55A0A075B5W6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-55A0A075B5W6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv1-55A0A075B5W6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.09■□□□□ 0.81
Ighv1-55A0A075B5W6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.81
Ighv1-55A0A075B5W6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ighv1-55A0A075B5W6 Gm16148-201ENSMUST00000119653 893 ntBASIC20.08■□□□□ 0.81
Ighv1-55A0A075B5W6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.08■□□□□ 0.8
Ighv1-55A0A075B5W6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.07■□□□□ 0.8
Ighv1-55A0A075B5W6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv1-55A0A075B5W6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv1-55A0A075B5W6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ighv1-55A0A075B5W6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv1-55A0A075B5W6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.04■□□□□ 0.8
Ighv1-55A0A075B5W6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-55A0A075B5W6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv1-55A0A075B5W6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-55A0A075B5W6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-55A0A075B5W6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv1-55A0A075B5W6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ighv1-55A0A075B5W6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv1-55A0A075B5W6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv1-55A0A075B5W6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ighv1-55A0A075B5W6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-55A0A075B5W6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv1-55A0A075B5W6 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.97■□□□□ 0.79
Ighv1-55A0A075B5W6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ighv1-55A0A075B5W6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-55A0A075B5W6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv1-55A0A075B5W6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ighv1-55A0A075B5W6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ighv1-55A0A075B5W6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ighv1-55A0A075B5W6 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.91■□□□□ 0.78
Ighv1-55A0A075B5W6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ighv1-55A0A075B5W6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ighv1-55A0A075B5W6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ighv1-55A0A075B5W6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Ighv1-55A0A075B5W6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ighv1-55A0A075B5W6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ighv1-55A0A075B5W6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ighv1-55A0A075B5W6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ighv1-55A0A075B5W6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-55A0A075B5W6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.86■□□□□ 0.77
Ighv1-55A0A075B5W6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-55A0A075B5W6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-55A0A075B5W6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ighv1-55A0A075B5W6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ighv1-55A0A075B5W6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-55A0A075B5W6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ighv1-55A0A075B5W6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Ighv1-55A0A075B5W6 Zxda-201ENSMUST00000117281 2621 ntBASIC19.84■□□□□ 0.77
Ighv1-55A0A075B5W6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ighv1-55A0A075B5W6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ighv1-55A0A075B5W6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ighv1-55A0A075B5W6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ighv1-55A0A075B5W6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ighv1-55A0A075B5W6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ighv1-55A0A075B5W6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-55A0A075B5W6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-55A0A075B5W6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-55A0A075B5W6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ighv1-55A0A075B5W6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-55A0A075B5W6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-55A0A075B5W6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-55A0A075B5W6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Ighv1-55A0A075B5W6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-55A0A075B5W6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-55A0A075B5W6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ighv1-55A0A075B5W6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-55A0A075B5W6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-55A0A075B5W6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-55A0A075B5W6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-55A0A075B5W6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.76■□□□□ 0.75
Ighv1-55A0A075B5W6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-55A0A075B5W6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-55A0A075B5W6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-55A0A075B5W6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ighv1-55A0A075B5W6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-55A0A075B5W6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-55A0A075B5W6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ighv1-55A0A075B5W6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-55A0A075B5W6 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.72■□□□□ 0.75
Ighv1-55A0A075B5W6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-55A0A075B5W6 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.71■□□□□ 0.75
Ighv1-55A0A075B5W6 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.7■□□□□ 0.74
Ighv1-55A0A075B5W6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-55A0A075B5W6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ighv1-55A0A075B5W6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ighv1-55A0A075B5W6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-55A0A075B5W6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-55A0A075B5W6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-55A0A075B5W6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-55A0A075B5W6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-55A0A075B5W6 Zfp131-205ENSMUST00000223812 663 ntBASIC19.67■□□□□ 0.74
Ighv1-55A0A075B5W6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-55A0A075B5W6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-55A0A075B5W6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-55A0A075B5W6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms