Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn5Q9WU28 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.71■□□□□ 0.11
Pfdn5Q9WU28 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pfdn5Q9WU28 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn5Q9WU28 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn5Q9WU28 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Pfdn5Q9WU28 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pfdn5Q9WU28 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pfdn5Q9WU28 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pfdn5Q9WU28 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn5Q9WU28 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn5Q9WU28 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn5Q9WU28 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pfdn5Q9WU28 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Gm12366-201ENSMUST00000121722 873 ntBASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Gm5786-201ENSMUST00000085368 882 ntBASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.66■□□□□ 0.1
Pfdn5Q9WU28 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn5Q9WU28 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn5Q9WU28 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pfdn5Q9WU28 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms