Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLCF1Q9UBD9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 AC092437.1-201ENST00000624794 1048 ntBASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.3■□□□□ 0.68
CLCF1Q9UBD9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.29■□□□□ 0.68
CLCF1Q9UBD9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCF1Q9UBD9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.29■□□□□ 0.68
CLCF1Q9UBD9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLCF1Q9UBD9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLCF1Q9UBD9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLCF1Q9UBD9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLCF1Q9UBD9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLCF1Q9UBD9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCF1Q9UBD9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCF1Q9UBD9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLCF1Q9UBD9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.28■□□□□ 0.68
CLCF1Q9UBD9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.28■□□□□ 0.68
CLCF1Q9UBD9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.28■□□□□ 0.68
CLCF1Q9UBD9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLCF1Q9UBD9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCF1Q9UBD9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLCF1Q9UBD9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCF1Q9UBD9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLCF1Q9UBD9 AC005224.4-201ENST00000583262 1652 ntBASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 AC009237.3-201ENST00000393279 1427 ntBASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 AL137784.2-201ENST00000607332 1000 ntBASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLCF1Q9UBD9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.27■□□□□ 0.67
CLCF1Q9UBD9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLCF1Q9UBD9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 AP004607.4-201ENST00000530158 1459 ntBASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.26■□□□□ 0.67
CLCF1Q9UBD9 AC004854.2-201ENST00000608450 1441 ntBASIC19.25■□□□□ 0.67
CLCF1Q9UBD9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCF1Q9UBD9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCF1Q9UBD9 DUSP8P5-201ENST00000422884 1815 ntBASIC19.25■□□□□ 0.67
CLCF1Q9UBD9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CLCF1Q9UBD9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCF1Q9UBD9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCF1Q9UBD9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLCF1Q9UBD9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.25■□□□□ 0.67
CLCF1Q9UBD9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.25■□□□□ 0.67
CLCF1Q9UBD9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLCF1Q9UBD9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CLCF1Q9UBD9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCF1Q9UBD9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.24■□□□□ 0.67
CLCF1Q9UBD9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLCF1Q9UBD9 AC079140.4-201ENST00000507448 529 ntBASIC19.24■□□□□ 0.67
CLCF1Q9UBD9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.24■□□□□ 0.67
CLCF1Q9UBD9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.24■□□□□ 0.67
CLCF1Q9UBD9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CLCF1Q9UBD9 AC087742.1-201ENST00000575880 1738 ntBASIC19.24■□□□□ 0.67
CLCF1Q9UBD9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms