Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hmg20aQ9DC33 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hmg20aQ9DC33 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmg20aQ9DC33 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 Gm12366-201ENSMUST00000121722 873 ntBASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 Gm5786-201ENSMUST00000085368 882 ntBASIC17.52■□□□□ 0.4
Hmg20aQ9DC33 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Hmg20aQ9DC33 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.52■□□□□ 0.39
Hmg20aQ9DC33 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.52■□□□□ 0.39
Hmg20aQ9DC33 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmg20aQ9DC33 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Hmg20aQ9DC33 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hmg20aQ9DC33 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Hmg20aQ9DC33 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmg20aQ9DC33 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmg20aQ9DC33 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmg20aQ9DC33 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmg20aQ9DC33 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmg20aQ9DC33 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmg20aQ9DC33 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmg20aQ9DC33 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hmg20aQ9DC33 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Hmg20aQ9DC33 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmg20aQ9DC33 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmg20aQ9DC33 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmg20aQ9DC33 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hmg20aQ9DC33 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms