Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndufa11Q9D8B4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ndufa11Q9D8B4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndufa11Q9D8B4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndufa11Q9D8B4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndufa11Q9D8B4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.68■□□□□ 0.26
Ndufa11Q9D8B4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ndufa11Q9D8B4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ndufa11Q9D8B4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ndufa11Q9D8B4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Ndufa11Q9D8B4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ndufa11Q9D8B4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ndufa11Q9D8B4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndufa11Q9D8B4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.65■□□□□ 0.26
Ndufa11Q9D8B4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndufa11Q9D8B4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ndufa11Q9D8B4 Gm18666-201ENSMUST00000190039 958 ntBASIC16.65■□□□□ 0.26
Ndufa11Q9D8B4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ndufa11Q9D8B4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.65■□□□□ 0.26
Ndufa11Q9D8B4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndufa11Q9D8B4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndufa11Q9D8B4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ndufa11Q9D8B4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ndufa11Q9D8B4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ndufa11Q9D8B4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Dio3-201ENSMUST00000097228 1449 ntBASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ndufa11Q9D8B4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Gm715-201ENSMUST00000117865 831 ntBASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Ndufa11Q9D8B4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ndufa11Q9D8B4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ndufa11Q9D8B4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ndufa11Q9D8B4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Ndufa11Q9D8B4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.61■□□□□ 0.25
Ndufa11Q9D8B4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ndufa11Q9D8B4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ndufa11Q9D8B4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms