Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Gm40848-201ENSMUST00000221998 324 ntBASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.76■□□□□ 0.75
Pcdhb6Q91XZ4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 Iqck-206ENSMUST00000208658 2891 ntBASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Pcdhb6Q91XZ4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb6Q91XZ4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhb6Q91XZ4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb6Q91XZ4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdhb6Q91XZ4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb6Q91XZ4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.72■□□□□ 0.75
Pcdhb6Q91XZ4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb6Q91XZ4 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.72■□□□□ 0.75
Pcdhb6Q91XZ4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb6Q91XZ4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb6Q91XZ4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb6Q91XZ4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb6Q91XZ4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb6Q91XZ4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.71■□□□□ 0.75
Pcdhb6Q91XZ4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb6Q91XZ4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb6Q91XZ4 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms