Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Uhrf1Q8VDF2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.95■□□□□ 0.78
Uhrf1Q8VDF2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Uhrf1Q8VDF2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Uhrf1Q8VDF2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Uhrf1Q8VDF2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Uhrf1Q8VDF2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Uhrf1Q8VDF2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Uhrf1Q8VDF2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Uhrf1Q8VDF2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Uhrf1Q8VDF2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.94■□□□□ 0.78
Uhrf1Q8VDF2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Uhrf1Q8VDF2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Uhrf1Q8VDF2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.93■□□□□ 0.78
Uhrf1Q8VDF2 Gm27275-201ENSMUST00000184318 272 ntBASIC19.93■□□□□ 0.78
Uhrf1Q8VDF2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Uhrf1Q8VDF2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Uhrf1Q8VDF2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Uhrf1Q8VDF2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uhrf1Q8VDF2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uhrf1Q8VDF2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uhrf1Q8VDF2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Uhrf1Q8VDF2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Uhrf1Q8VDF2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uhrf1Q8VDF2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uhrf1Q8VDF2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uhrf1Q8VDF2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Uhrf1Q8VDF2 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.92■□□□□ 0.78
Uhrf1Q8VDF2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Uhrf1Q8VDF2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Uhrf1Q8VDF2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Uhrf1Q8VDF2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Uhrf1Q8VDF2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Uhrf1Q8VDF2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.9■□□□□ 0.78
Uhrf1Q8VDF2 Mir6982-201ENSMUST00000184354 68 ntBASIC19.9■□□□□ 0.78
Uhrf1Q8VDF2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Uhrf1Q8VDF2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Uhrf1Q8VDF2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Uhrf1Q8VDF2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Uhrf1Q8VDF2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.9■□□□□ 0.78
Uhrf1Q8VDF2 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.9■□□□□ 0.78
Uhrf1Q8VDF2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Uhrf1Q8VDF2 Gm12896-201ENSMUST00000118430 226 ntBASIC19.89■□□□□ 0.77
Uhrf1Q8VDF2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.89■□□□□ 0.77
Uhrf1Q8VDF2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.89■□□□□ 0.77
Uhrf1Q8VDF2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Uhrf1Q8VDF2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Uhrf1Q8VDF2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Uhrf1Q8VDF2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Uhrf1Q8VDF2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Uhrf1Q8VDF2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Uhrf1Q8VDF2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Uhrf1Q8VDF2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Uhrf1Q8VDF2 Gm22325-201ENSMUST00000158904 308 ntBASIC19.87■□□□□ 0.77
Uhrf1Q8VDF2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.87■□□□□ 0.77
Uhrf1Q8VDF2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Uhrf1Q8VDF2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Uhrf1Q8VDF2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Uhrf1Q8VDF2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uhrf1Q8VDF2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Uhrf1Q8VDF2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Uhrf1Q8VDF2 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.86■□□□□ 0.77
Uhrf1Q8VDF2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms