Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nup35Q8R4R6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.67■□□□□ 0.1
Nup35Q8R4R6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup35Q8R4R6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nup35Q8R4R6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Cap2-205ENSMUST00000225824 1634 ntBASIC15.66■□□□□ 0.1
Nup35Q8R4R6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nup35Q8R4R6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.66■□□□□ 0.1
Nup35Q8R4R6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nup35Q8R4R6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
Nup35Q8R4R6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nup35Q8R4R6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Nup35Q8R4R6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup35Q8R4R6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.62■□□□□ 0.09
Nup35Q8R4R6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup35Q8R4R6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.62■□□□□ 0.09
Nup35Q8R4R6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup35Q8R4R6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup35Q8R4R6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.62■□□□□ 0.09
Nup35Q8R4R6 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.62■□□□□ 0.09
Nup35Q8R4R6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup35Q8R4R6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup35Q8R4R6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.62■□□□□ 0.09
Nup35Q8R4R6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nup35Q8R4R6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nup35Q8R4R6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nup35Q8R4R6 Rarb-207ENSMUST00000225921 2756 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms