Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Atf7Q8R0S1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.69■■□□□ 1.22
Atf7Q8R0S1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Atf7Q8R0S1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Atf7Q8R0S1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Atf7Q8R0S1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Atf7Q8R0S1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Atf7Q8R0S1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Atf7Q8R0S1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Atf7Q8R0S1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.68■■□□□ 1.22
Atf7Q8R0S1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Atf7Q8R0S1 Gm27801-201ENSMUST00000184174 223 ntBASIC22.68■■□□□ 1.22
Atf7Q8R0S1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Atf7Q8R0S1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Atf7Q8R0S1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Atf7Q8R0S1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 Gm40848-201ENSMUST00000221998 324 ntBASIC22.67■■□□□ 1.22
Atf7Q8R0S1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Atf7Q8R0S1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Atf7Q8R0S1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Atf7Q8R0S1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Atf7Q8R0S1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Atf7Q8R0S1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Atf7Q8R0S1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Atf7Q8R0S1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Atf7Q8R0S1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Atf7Q8R0S1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.65■■□□□ 1.22
Atf7Q8R0S1 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.64■■□□□ 1.22
Atf7Q8R0S1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Atf7Q8R0S1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Atf7Q8R0S1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Atf7Q8R0S1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Atf7Q8R0S1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Atf7Q8R0S1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
Atf7Q8R0S1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Atf7Q8R0S1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Atf7Q8R0S1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Atf7Q8R0S1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.62■■□□□ 1.21
Atf7Q8R0S1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Atf7Q8R0S1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.61■■□□□ 1.21
Atf7Q8R0S1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms