Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.3■□□□□ 0.52
Hmgcs1Q8JZK9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgcs1Q8JZK9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Hmgcs1Q8JZK9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgcs1Q8JZK9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Hmgcs1Q8JZK9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hmgcs1Q8JZK9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hmgcs1Q8JZK9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgcs1Q8JZK9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.27■□□□□ 0.52
Hmgcs1Q8JZK9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgcs1Q8JZK9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgcs1Q8JZK9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgcs1Q8JZK9 Gm43137-201ENSMUST00000198052 594 ntBASIC18.27■□□□□ 0.52
Hmgcs1Q8JZK9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hmgcs1Q8JZK9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Hmgcs1Q8JZK9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hmgcs1Q8JZK9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hmgcs1Q8JZK9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Hmgcs1Q8JZK9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcs1Q8JZK9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcs1Q8JZK9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcs1Q8JZK9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.25■□□□□ 0.51
Hmgcs1Q8JZK9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcs1Q8JZK9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.25■□□□□ 0.51
Hmgcs1Q8JZK9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcs1Q8JZK9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.25■□□□□ 0.51
Hmgcs1Q8JZK9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcs1Q8JZK9 Gm13241-201ENSMUST00000094493 780 ntBASIC18.25■□□□□ 0.51
Hmgcs1Q8JZK9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcs1Q8JZK9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Hmgcs1Q8JZK9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcs1Q8JZK9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcs1Q8JZK9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcs1Q8JZK9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hmgcs1Q8JZK9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcs1Q8JZK9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcs1Q8JZK9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcs1Q8JZK9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcs1Q8JZK9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcs1Q8JZK9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcs1Q8JZK9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Spcs1-204ENSMUST00000226782 949 ntBASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcs1Q8JZK9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.22■□□□□ 0.51
Hmgcs1Q8JZK9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms