Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Hist3h2bbQ8CGP0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist3h2bbQ8CGP0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.64□□□□□ -0.07
Hist3h2bbQ8CGP0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hist3h2bbQ8CGP0 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.64□□□□□ -0.07
Hist3h2bbQ8CGP0 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.64□□□□□ -0.07
Hist3h2bbQ8CGP0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist3h2bbQ8CGP0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hist3h2bbQ8CGP0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist3h2bbQ8CGP0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist3h2bbQ8CGP0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist3h2bbQ8CGP0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.62□□□□□ -0.07
Hist3h2bbQ8CGP0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hist3h2bbQ8CGP0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hist3h2bbQ8CGP0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hist3h2bbQ8CGP0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hist3h2bbQ8CGP0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hist3h2bbQ8CGP0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hist3h2bbQ8CGP0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hist3h2bbQ8CGP0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.59□□□□□ -0.07
Hist3h2bbQ8CGP0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hist3h2bbQ8CGP0 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.59□□□□□ -0.07
Hist3h2bbQ8CGP0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hist3h2bbQ8CGP0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Hist3h2bbQ8CGP0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hist3h2bbQ8CGP0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms