Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SprnQ8BWU1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.03■□□□□ 0.32
SprnQ8BWU1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SprnQ8BWU1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SprnQ8BWU1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SprnQ8BWU1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SprnQ8BWU1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SprnQ8BWU1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.02■□□□□ 0.32
SprnQ8BWU1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SprnQ8BWU1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SprnQ8BWU1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SprnQ8BWU1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.02■□□□□ 0.31
SprnQ8BWU1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SprnQ8BWU1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SprnQ8BWU1 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.01■□□□□ 0.31
SprnQ8BWU1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.01■□□□□ 0.31
SprnQ8BWU1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Gm22238-201ENSMUST00000175222 88 ntBASIC17.01■□□□□ 0.31
SprnQ8BWU1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.01■□□□□ 0.31
SprnQ8BWU1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SprnQ8BWU1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SprnQ8BWU1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17■□□□□ 0.31
SprnQ8BWU1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SprnQ8BWU1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SprnQ8BWU1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SprnQ8BWU1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SprnQ8BWU1 Gm32699-201ENSMUST00000221728 1988 ntBASIC17■□□□□ 0.31
SprnQ8BWU1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17■□□□□ 0.31
SprnQ8BWU1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17■□□□□ 0.31
SprnQ8BWU1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17■□□□□ 0.31
SprnQ8BWU1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
SprnQ8BWU1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SprnQ8BWU1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SprnQ8BWU1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SprnQ8BWU1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SprnQ8BWU1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SprnQ8BWU1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.99■□□□□ 0.31
SprnQ8BWU1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SprnQ8BWU1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SprnQ8BWU1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SprnQ8BWU1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SprnQ8BWU1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SprnQ8BWU1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SprnQ8BWU1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SprnQ8BWU1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SprnQ8BWU1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SprnQ8BWU1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SprnQ8BWU1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SprnQ8BWU1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
SprnQ8BWU1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SprnQ8BWU1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SprnQ8BWU1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.97■□□□□ 0.31
SprnQ8BWU1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SprnQ8BWU1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SprnQ8BWU1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SprnQ8BWU1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.96■□□□□ 0.31
SprnQ8BWU1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SprnQ8BWU1 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.96■□□□□ 0.31
SprnQ8BWU1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.96■□□□□ 0.31
SprnQ8BWU1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SprnQ8BWU1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SprnQ8BWU1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SprnQ8BWU1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SprnQ8BWU1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms