Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm11Q8BUV6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm11Q8BUV6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lsm11Q8BUV6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.29■□□□□ 0.2
Lsm11Q8BUV6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lsm11Q8BUV6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm11Q8BUV6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm11Q8BUV6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm11Q8BUV6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.27■□□□□ 0.2
Lsm11Q8BUV6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm11Q8BUV6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.27■□□□□ 0.2
Lsm11Q8BUV6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.27■□□□□ 0.2
Lsm11Q8BUV6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.27■□□□□ 0.2
Lsm11Q8BUV6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.27■□□□□ 0.2
Lsm11Q8BUV6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lsm11Q8BUV6 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.27■□□□□ 0.19
Lsm11Q8BUV6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm11Q8BUV6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lsm11Q8BUV6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.27■□□□□ 0.19
Lsm11Q8BUV6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm11Q8BUV6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.26■□□□□ 0.19
Lsm11Q8BUV6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm11Q8BUV6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm11Q8BUV6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm11Q8BUV6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lsm11Q8BUV6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm11Q8BUV6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm11Q8BUV6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm11Q8BUV6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm11Q8BUV6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lsm11Q8BUV6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm11Q8BUV6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm11Q8BUV6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm11Q8BUV6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm11Q8BUV6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm11Q8BUV6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lsm11Q8BUV6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms