Protein–RNA interactions for Protein: Q8BUN5

Smad3, Mothers against decapentaplegic homolog 3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad3Q8BUN5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smad3Q8BUN5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smad3Q8BUN5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.49■□□□□ 0.87
Smad3Q8BUN5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
Smad3Q8BUN5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Gm2559-201ENSMUST00000201323 363 ntBASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Gm9987-201ENSMUST00000069768 567 ntBASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Smad3Q8BUN5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smad3Q8BUN5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Smad3Q8BUN5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smad3Q8BUN5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Smad3Q8BUN5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
Smad3Q8BUN5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.44■□□□□ 0.86
Smad3Q8BUN5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.44■□□□□ 0.86
Smad3Q8BUN5 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.44■□□□□ 0.86
Smad3Q8BUN5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smad3Q8BUN5 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smad3Q8BUN5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smad3Q8BUN5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smad3Q8BUN5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.43■□□□□ 0.86
Smad3Q8BUN5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.43■□□□□ 0.86
Smad3Q8BUN5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smad3Q8BUN5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Smad3Q8BUN5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Smad3Q8BUN5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smad3Q8BUN5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smad3Q8BUN5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smad3Q8BUN5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Smad3Q8BUN5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smad3Q8BUN5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Smad3Q8BUN5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smad3Q8BUN5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smad3Q8BUN5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.42■□□□□ 0.86
Smad3Q8BUN5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.42■□□□□ 0.86
Smad3Q8BUN5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Smad3Q8BUN5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smad3Q8BUN5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smad3Q8BUN5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smad3Q8BUN5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smad3Q8BUN5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smad3Q8BUN5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.41■□□□□ 0.86
Smad3Q8BUN5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smad3Q8BUN5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smad3Q8BUN5 Gm18666-201ENSMUST00000190039 958 ntBASIC20.41■□□□□ 0.86
Smad3Q8BUN5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.41■□□□□ 0.86
Smad3Q8BUN5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.41■□□□□ 0.86
Smad3Q8BUN5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smad3Q8BUN5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smad3Q8BUN5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smad3Q8BUN5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms