Protein–RNA interactions for Protein: Q80VM3

Ttc29, Tetratricopeptide repeat protein 29, mousemouse

Predictions only

Length 471 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc29Q80VM3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ttc29Q80VM3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ttc29Q80VM3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.4■□□□□ 0.54
Ttc29Q80VM3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ttc29Q80VM3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.4■□□□□ 0.54
Ttc29Q80VM3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ttc29Q80VM3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ttc29Q80VM3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ttc29Q80VM3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ttc29Q80VM3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.39■□□□□ 0.53
Ttc29Q80VM3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ttc29Q80VM3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc29Q80VM3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc29Q80VM3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ttc29Q80VM3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.37■□□□□ 0.53
Ttc29Q80VM3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ttc29Q80VM3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.37■□□□□ 0.53
Ttc29Q80VM3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc29Q80VM3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc29Q80VM3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ttc29Q80VM3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ttc29Q80VM3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ttc29Q80VM3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.35■□□□□ 0.53
Ttc29Q80VM3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ttc29Q80VM3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ttc29Q80VM3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ttc29Q80VM3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ttc29Q80VM3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc29Q80VM3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.33■□□□□ 0.52
Ttc29Q80VM3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ttc29Q80VM3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ttc29Q80VM3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms