Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3d21Q7TSG5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3d21Q7TSG5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21■□□□□ 0.95
Sh3d21Q7TSG5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3d21Q7TSG5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3d21Q7TSG5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sh3d21Q7TSG5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3d21Q7TSG5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3d21Q7TSG5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3d21Q7TSG5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Sh3d21Q7TSG5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3d21Q7TSG5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Sh3d21Q7TSG5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3d21Q7TSG5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3d21Q7TSG5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.97■□□□□ 0.95
Sh3d21Q7TSG5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sh3d21Q7TSG5 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3d21Q7TSG5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3d21Q7TSG5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.97■□□□□ 0.95
Sh3d21Q7TSG5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.97■□□□□ 0.95
Sh3d21Q7TSG5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3d21Q7TSG5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3d21Q7TSG5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3d21Q7TSG5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3d21Q7TSG5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Sh3d21Q7TSG5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3d21Q7TSG5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3d21Q7TSG5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3d21Q7TSG5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Sh3d21Q7TSG5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d21Q7TSG5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d21Q7TSG5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d21Q7TSG5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d21Q7TSG5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d21Q7TSG5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3d21Q7TSG5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.92■□□□□ 0.94
Sh3d21Q7TSG5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3d21Q7TSG5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3d21Q7TSG5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3d21Q7TSG5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3d21Q7TSG5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Sh3d21Q7TSG5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3d21Q7TSG5 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms