Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Gm12251-201ENSMUST00000117893 792 ntBASIC18.29■□□□□ 0.52
Snx6Q6P8X1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx6Q6P8X1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx6Q6P8X1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.28■□□□□ 0.52
Snx6Q6P8X1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx6Q6P8X1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx6Q6P8X1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.27■□□□□ 0.52
Snx6Q6P8X1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx6Q6P8X1 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.27■□□□□ 0.52
Snx6Q6P8X1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx6Q6P8X1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx6Q6P8X1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Snx6Q6P8X1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Snx6Q6P8X1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Snx6Q6P8X1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Gm27454-201ENSMUST00000185090 204 ntBASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snx6Q6P8X1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Gm8493-201ENSMUST00000196881 489 ntBASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snx6Q6P8X1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx6Q6P8X1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx6Q6P8X1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx6Q6P8X1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Snx6Q6P8X1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Snx6Q6P8X1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.24■□□□□ 0.51
Snx6Q6P8X1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx6Q6P8X1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Snx6Q6P8X1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.24■□□□□ 0.51
Snx6Q6P8X1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snx6Q6P8X1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Snx6Q6P8X1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Snx6Q6P8X1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx6Q6P8X1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Snx6Q6P8X1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx6Q6P8X1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx6Q6P8X1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Snx6Q6P8X1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.23■□□□□ 0.51
Snx6Q6P8X1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx6Q6P8X1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx6Q6P8X1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx6Q6P8X1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.23■□□□□ 0.51
Snx6Q6P8X1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.23■□□□□ 0.51
Snx6Q6P8X1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snx6Q6P8X1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx6Q6P8X1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx6Q6P8X1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Snx6Q6P8X1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Snx6Q6P8X1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx6Q6P8X1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx6Q6P8X1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snx6Q6P8X1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.21■□□□□ 0.51
Snx6Q6P8X1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Snx6Q6P8X1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms