Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpn1lQ5XFR0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.18■□□□□ 0.66
Pabpn1lQ5XFR0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpn1lQ5XFR0 Gm15546-201ENSMUST00000122095 826 ntBASIC19.18■□□□□ 0.66
Pabpn1lQ5XFR0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpn1lQ5XFR0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpn1lQ5XFR0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpn1lQ5XFR0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpn1lQ5XFR0 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.18■□□□□ 0.66
Pabpn1lQ5XFR0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpn1lQ5XFR0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pabpn1lQ5XFR0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pabpn1lQ5XFR0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.16■□□□□ 0.66
Pabpn1lQ5XFR0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1lQ5XFR0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1lQ5XFR0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1lQ5XFR0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1lQ5XFR0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1lQ5XFR0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1lQ5XFR0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.15■□□□□ 0.66
Pabpn1lQ5XFR0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1lQ5XFR0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1lQ5XFR0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1lQ5XFR0 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.15■□□□□ 0.66
Pabpn1lQ5XFR0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1lQ5XFR0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Pabpn1lQ5XFR0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.14■□□□□ 0.65
Pabpn1lQ5XFR0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1lQ5XFR0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.14■□□□□ 0.65
Pabpn1lQ5XFR0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1lQ5XFR0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pabpn1lQ5XFR0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1lQ5XFR0 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.14■□□□□ 0.65
Pabpn1lQ5XFR0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Pabpn1lQ5XFR0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Gm13238-201ENSMUST00000117655 780 ntBASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1lQ5XFR0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms