Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Gm14121-201ENSMUST00000121441 1380 ntBASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.1□□□□□ -0.31
Trav3-1Q5R1I8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3-1Q5R1I8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav3-1Q5R1I8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Gm27322-201ENSMUST00000184007 104 ntBASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3-1Q5R1I8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3-1Q5R1I8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.06□□□□□ -0.32
Trav3-1Q5R1I8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-1Q5R1I8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav3-1Q5R1I8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-1Q5R1I8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-1Q5R1I8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-1Q5R1I8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-1Q5R1I8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-1Q5R1I8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-1Q5R1I8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trav3-1Q5R1I8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav3-1Q5R1I8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms