Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-3Q5R1I1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Gm12922-201ENSMUST00000120626 809 ntBASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-3Q5R1I1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Golgb1-201ENSMUST00000023534 498 ntBASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-3Q5R1I1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-3Q5R1I1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav7d-3Q5R1I1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-3Q5R1I1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav7d-3Q5R1I1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-3Q5R1I1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav7d-3Q5R1I1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-3Q5R1I1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-3Q5R1I1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav7d-3Q5R1I1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-3Q5R1I1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-3Q5R1I1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav7d-3Q5R1I1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav7d-3Q5R1I1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav7d-3Q5R1I1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav7d-3Q5R1I1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav7d-3Q5R1I1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav7d-3Q5R1I1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav7d-3Q5R1I1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7d-3Q5R1I1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7d-3Q5R1I1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav7d-3Q5R1I1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms