Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rnf43Q5NCP0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf43Q5NCP0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf43Q5NCP0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf43Q5NCP0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf43Q5NCP0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Rnf43Q5NCP0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf43Q5NCP0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf43Q5NCP0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.58■□□□□ 0.72
Rnf43Q5NCP0 Gm37856-201ENSMUST00000191634 999 ntBASIC19.58■□□□□ 0.72
Rnf43Q5NCP0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf43Q5NCP0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf43Q5NCP0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf43Q5NCP0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf43Q5NCP0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf43Q5NCP0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.58■□□□□ 0.72
Rnf43Q5NCP0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf43Q5NCP0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.57■□□□□ 0.72
Rnf43Q5NCP0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.57■□□□□ 0.72
Rnf43Q5NCP0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf43Q5NCP0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.57■□□□□ 0.72
Rnf43Q5NCP0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.57■□□□□ 0.72
Rnf43Q5NCP0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rnf43Q5NCP0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf43Q5NCP0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf43Q5NCP0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf43Q5NCP0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf43Q5NCP0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf43Q5NCP0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf43Q5NCP0 Gm26524-201ENSMUST00000192339 390 ntBASIC19.56■□□□□ 0.72
Rnf43Q5NCP0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf43Q5NCP0 AA386476-201ENSMUST00000098781 1665 ntBASIC19.56■□□□□ 0.72
Rnf43Q5NCP0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf43Q5NCP0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf43Q5NCP0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf43Q5NCP0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf43Q5NCP0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf43Q5NCP0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf43Q5NCP0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf43Q5NCP0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.53■□□□□ 0.72
Rnf43Q5NCP0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.53■□□□□ 0.72
Rnf43Q5NCP0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf43Q5NCP0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf43Q5NCP0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rnf43Q5NCP0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf43Q5NCP0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf43Q5NCP0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf43Q5NCP0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf43Q5NCP0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.52■□□□□ 0.72
Rnf43Q5NCP0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.52■□□□□ 0.72
Rnf43Q5NCP0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.52■□□□□ 0.72
Rnf43Q5NCP0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf43Q5NCP0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf43Q5NCP0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf43Q5NCP0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf43Q5NCP0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf43Q5NCP0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf43Q5NCP0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf43Q5NCP0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf43Q5NCP0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms