Protein–RNA interactions for Protein: Q3USS0

Gm6899, Predicted gene 6899, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6899Q3USS0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm6899Q3USS0 Notumos-201ENSMUST00000151998 2659 ntBASIC16.87■□□□□ 0.29
Gm6899Q3USS0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm6899Q3USS0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.87■□□□□ 0.29
Gm6899Q3USS0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.86■□□□□ 0.29
Gm6899Q3USS0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm6899Q3USS0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm6899Q3USS0 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.86■□□□□ 0.29
Gm6899Q3USS0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm6899Q3USS0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm6899Q3USS0 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.86■□□□□ 0.29
Gm6899Q3USS0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm6899Q3USS0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Gm6899Q3USS0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm6899Q3USS0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm6899Q3USS0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.85■□□□□ 0.29
Gm6899Q3USS0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm6899Q3USS0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.85■□□□□ 0.29
Gm6899Q3USS0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm6899Q3USS0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Gm6899Q3USS0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Gm6899Q3USS0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Gm6899Q3USS0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Gm6899Q3USS0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm6899Q3USS0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Gm6899Q3USS0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm6899Q3USS0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm6899Q3USS0 Gm42569-201ENSMUST00000200539 472 ntBASIC16.83■□□□□ 0.28
Gm6899Q3USS0 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.83■□□□□ 0.28
Gm6899Q3USS0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm6899Q3USS0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm6899Q3USS0 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.83■□□□□ 0.28
Gm6899Q3USS0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm6899Q3USS0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm6899Q3USS0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm6899Q3USS0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm6899Q3USS0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm6899Q3USS0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm6899Q3USS0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm6899Q3USS0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.82■□□□□ 0.28
Gm6899Q3USS0 Gm7291-201ENSMUST00000199147 382 ntBASIC16.82■□□□□ 0.28
Gm6899Q3USS0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm6899Q3USS0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm6899Q3USS0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.8■□□□□ 0.28
Gm6899Q3USS0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Gm7514-201ENSMUST00000209475 934 ntBASIC16.79■□□□□ 0.28
Gm6899Q3USS0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm6899Q3USS0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms