Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RFX7Q2KHR2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.4■■□□□ 1.82
RFX7Q2KHR2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RFX7Q2KHR2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RFX7Q2KHR2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.39■■□□□ 1.82
RFX7Q2KHR2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RFX7Q2KHR2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
RFX7Q2KHR2 AC137767.1-201ENST00000602918 1920 ntBASIC26.39■■□□□ 1.82
RFX7Q2KHR2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RFX7Q2KHR2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.39■■□□□ 1.82
RFX7Q2KHR2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RFX7Q2KHR2 KRT18P14-201ENST00000534205 1250 ntBASIC26.39■■□□□ 1.82
RFX7Q2KHR2 KRT18P61-201ENST00000585825 1298 ntBASIC26.39■■□□□ 1.82
RFX7Q2KHR2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.39■■□□□ 1.82
RFX7Q2KHR2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RFX7Q2KHR2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
RFX7Q2KHR2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
RFX7Q2KHR2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RFX7Q2KHR2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
RFX7Q2KHR2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.81
RFX7Q2KHR2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RFX7Q2KHR2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.39■■□□□ 1.81
RFX7Q2KHR2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.39■■□□□ 1.81
RFX7Q2KHR2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.81
RFX7Q2KHR2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
RFX7Q2KHR2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFX7Q2KHR2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC26.38■■□□□ 1.81
RFX7Q2KHR2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFX7Q2KHR2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.38■■□□□ 1.81
RFX7Q2KHR2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFX7Q2KHR2 GUSBP5-202ENST00000510805 1989 ntBASIC26.38■■□□□ 1.81
RFX7Q2KHR2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RFX7Q2KHR2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RFX7Q2KHR2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
RFX7Q2KHR2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RFX7Q2KHR2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RFX7Q2KHR2 AC087239.1-201ENST00000622671 572 ntBASIC26.37■■□□□ 1.81
RFX7Q2KHR2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
RFX7Q2KHR2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
RFX7Q2KHR2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.37■■□□□ 1.81
RFX7Q2KHR2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFX7Q2KHR2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.36■■□□□ 1.81
RFX7Q2KHR2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFX7Q2KHR2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFX7Q2KHR2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.36■■□□□ 1.81
RFX7Q2KHR2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
RFX7Q2KHR2 TPRG1LP1-201ENST00000598702 760 ntBASIC26.36■■□□□ 1.81
RFX7Q2KHR2 ECEL1P1-201ENST00000373592 1742 ntBASIC26.36■■□□□ 1.81
RFX7Q2KHR2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RFX7Q2KHR2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFX7Q2KHR2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFX7Q2KHR2 AC242852.2-201ENST00000615738 1807 ntBASIC26.35■■□□□ 1.81
RFX7Q2KHR2 AC010141.3-201ENST00000456659 717 ntBASIC26.35■■□□□ 1.81
RFX7Q2KHR2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.35■■□□□ 1.81
RFX7Q2KHR2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.35■■□□□ 1.81
RFX7Q2KHR2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFX7Q2KHR2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.35■■□□□ 1.81
RFX7Q2KHR2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.35■■□□□ 1.81
RFX7Q2KHR2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFX7Q2KHR2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
RFX7Q2KHR2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.35■■□□□ 1.81
RFX7Q2KHR2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RFX7Q2KHR2 LINC02228-203ENST00000641970 1355 ntBASIC26.35■■□□□ 1.81
RFX7Q2KHR2 AC139530.1-201ENST00000575312 1977 ntBASIC26.35■■□□□ 1.81
RFX7Q2KHR2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFX7Q2KHR2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFX7Q2KHR2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFX7Q2KHR2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
RFX7Q2KHR2 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.34■■□□□ 1.81
RFX7Q2KHR2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
RFX7Q2KHR2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.34■■□□□ 1.81
RFX7Q2KHR2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.34■■□□□ 1.81
RFX7Q2KHR2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.34■■□□□ 1.81
RFX7Q2KHR2 RARRES2P11-201ENST00000635158 484 ntBASIC26.34■■□□□ 1.81
RFX7Q2KHR2 AC105233.4-201ENST00000642045 216 ntBASIC26.34■■□□□ 1.81
RFX7Q2KHR2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RFX7Q2KHR2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RFX7Q2KHR2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RFX7Q2KHR2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
RFX7Q2KHR2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.33■■□□□ 1.81
RFX7Q2KHR2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.33■■□□□ 1.81
RFX7Q2KHR2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFX7Q2KHR2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RFX7Q2KHR2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.33■■□□□ 1.81
RFX7Q2KHR2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.33■■□□□ 1.81
RFX7Q2KHR2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RFX7Q2KHR2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
RFX7Q2KHR2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms