Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm5417-201ENSMUST00000079706 384 ntBASIC20.75■□□□□ 0.91
Col19a1Q0VF58 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Col19a1Q0VF58 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Col19a1Q0VF58 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col19a1Q0VF58 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col19a1Q0VF58 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col19a1Q0VF58 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Col19a1Q0VF58 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Col19a1Q0VF58 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col19a1Q0VF58 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.74■□□□□ 0.91
Col19a1Q0VF58 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.74■□□□□ 0.91
Col19a1Q0VF58 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col19a1Q0VF58 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col19a1Q0VF58 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col19a1Q0VF58 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col19a1Q0VF58 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col19a1Q0VF58 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col19a1Q0VF58 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col19a1Q0VF58 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col19a1Q0VF58 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col19a1Q0VF58 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.72■□□□□ 0.91
Col19a1Q0VF58 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col19a1Q0VF58 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col19a1Q0VF58 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col19a1Q0VF58 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col19a1Q0VF58 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col19a1Q0VF58 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Col19a1Q0VF58 AA386476-201ENSMUST00000098781 1665 ntBASIC20.71■□□□□ 0.91
Col19a1Q0VF58 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.71■□□□□ 0.91
Col19a1Q0VF58 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col19a1Q0VF58 Gm44549-201ENSMUST00000208351 577 ntBASIC20.71■□□□□ 0.91
Col19a1Q0VF58 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.71■□□□□ 0.91
Col19a1Q0VF58 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col19a1Q0VF58 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
Col19a1Q0VF58 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col19a1Q0VF58 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.71■□□□□ 0.91
Col19a1Q0VF58 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col19a1Q0VF58 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col19a1Q0VF58 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.7■□□□□ 0.9
Col19a1Q0VF58 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col19a1Q0VF58 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col19a1Q0VF58 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col19a1Q0VF58 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col19a1Q0VF58 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Col19a1Q0VF58 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col19a1Q0VF58 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Col19a1Q0VF58 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Col19a1Q0VF58 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col19a1Q0VF58 Gm27741-201ENSMUST00000185060 237 ntBASIC20.69■□□□□ 0.9
Col19a1Q0VF58 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col19a1Q0VF58 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col19a1Q0VF58 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col19a1Q0VF58 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col19a1Q0VF58 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col19a1Q0VF58 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col19a1Q0VF58 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col19a1Q0VF58 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.68■□□□□ 0.9
Col19a1Q0VF58 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Col19a1Q0VF58 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.68■□□□□ 0.9
Col19a1Q0VF58 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col19a1Q0VF58 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col19a1Q0VF58 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col19a1Q0VF58 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col19a1Q0VF58 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col19a1Q0VF58 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.67■□□□□ 0.9
Col19a1Q0VF58 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col19a1Q0VF58 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col19a1Q0VF58 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col19a1Q0VF58 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col19a1Q0VF58 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col19a1Q0VF58 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.66■□□□□ 0.9
Col19a1Q0VF58 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Col19a1Q0VF58 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.66■□□□□ 0.9
Col19a1Q0VF58 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col19a1Q0VF58 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Col19a1Q0VF58 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.66■□□□□ 0.9
Col19a1Q0VF58 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col19a1Q0VF58 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Col19a1Q0VF58 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Col19a1Q0VF58 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col19a1Q0VF58 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.65■□□□□ 0.9
Col19a1Q0VF58 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.65■□□□□ 0.9
Col19a1Q0VF58 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Col19a1Q0VF58 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Col19a1Q0VF58 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms