Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
Shox2P70390 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shox2P70390 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Shox2P70390 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Shox2P70390 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.06■□□□□ 0.64
Shox2P70390 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Shox2P70390 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shox2P70390 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shox2P70390 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shox2P70390 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shox2P70390 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Shox2P70390 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shox2P70390 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Shox2P70390 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.05■□□□□ 0.64
Shox2P70390 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.05■□□□□ 0.64
Shox2P70390 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Shox2P70390 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shox2P70390 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Shox2P70390 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.05■□□□□ 0.64
Shox2P70390 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shox2P70390 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shox2P70390 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shox2P70390 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shox2P70390 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shox2P70390 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Shox2P70390 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Shox2P70390 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shox2P70390 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shox2P70390 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shox2P70390 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shox2P70390 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shox2P70390 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Shox2P70390 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Shox2P70390 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shox2P70390 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shox2P70390 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shox2P70390 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shox2P70390 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Shox2P70390 Gm7332-201ENSMUST00000118351 454 ntBASIC19.03■□□□□ 0.64
Shox2P70390 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shox2P70390 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shox2P70390 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shox2P70390 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Shox2P70390 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shox2P70390 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shox2P70390 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shox2P70390 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.02■□□□□ 0.64
Shox2P70390 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shox2P70390 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shox2P70390 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Shox2P70390 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shox2P70390 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shox2P70390 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.02■□□□□ 0.64
Shox2P70390 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shox2P70390 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Shox2P70390 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shox2P70390 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Shox2P70390 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Shox2P70390 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shox2P70390 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shox2P70390 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shox2P70390 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Shox2P70390 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shox2P70390 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shox2P70390 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
Shox2P70390 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shox2P70390 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Shox2P70390 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shox2P70390 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.01■□□□□ 0.63
Shox2P70390 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shox2P70390 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Shox2P70390 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shox2P70390 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Shox2P70390 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Shox2P70390 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shox2P70390 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Shox2P70390 Ddx41-204ENSMUST00000224765 2199 ntBASIC19■□□□□ 0.63
Shox2P70390 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19■□□□□ 0.63
Shox2P70390 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shox2P70390 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shox2P70390 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shox2P70390 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19■□□□□ 0.63
Shox2P70390 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19■□□□□ 0.63
Shox2P70390 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19■□□□□ 0.63
Shox2P70390 Gm32699-201ENSMUST00000221728 1988 ntBASIC19■□□□□ 0.63
Shox2P70390 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Shox2P70390 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Shox2P70390 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms