Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rps28P62858 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rps28P62858 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.5□□□□□ -0.57
Rps28P62858 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rps28P62858 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC11.5□□□□□ -0.57
Rps28P62858 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC11.5□□□□□ -0.57
Rps28P62858 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Rps28P62858 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rps28P62858 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rps28P62858 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rps28P62858 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rps28P62858 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rps28P62858 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Rps28P62858 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rps28P62858 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rps28P62858 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rps28P62858 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rps28P62858 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rps28P62858 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Rps28P62858 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Dmtn-210ENSMUST00000228824 2377 ntBASIC11.49□□□□□ -0.57
Rps28P62858 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.49□□□□□ -0.57
Rps28P62858 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rps28P62858 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC11.49□□□□□ -0.57
Rps28P62858 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Gm44949-201ENSMUST00000206423 1450 ntBASIC11.48□□□□□ -0.57
Rps28P62858 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rps28P62858 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.48□□□□□ -0.57
Rps28P62858 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rps28P62858 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Rps28P62858 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rps28P62858 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rps28P62858 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rps28P62858 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rps28P62858 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rps28P62858 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rps28P62858 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.47□□□□□ -0.57
Rps28P62858 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rps28P62858 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rps28P62858 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Rps28P62858 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rps28P62858 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms