Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lsm3P62311 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.57■□□□□ 0.4
Lsm3P62311 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lsm3P62311 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Lsm3P62311 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm3P62311 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm3P62311 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm3P62311 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.56■□□□□ 0.4
Lsm3P62311 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm3P62311 Gm11687-201ENSMUST00000118911 886 ntBASIC17.56■□□□□ 0.4
Lsm3P62311 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm3P62311 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm3P62311 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm3P62311 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm3P62311 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm3P62311 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Lsm3P62311 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lsm3P62311 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Lsm3P62311 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Lsm3P62311 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Lsm3P62311 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm3P62311 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm3P62311 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm3P62311 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.54■□□□□ 0.4
Lsm3P62311 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm3P62311 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm3P62311 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm3P62311 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.54■□□□□ 0.4
Lsm3P62311 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm3P62311 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Lsm3P62311 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lsm3P62311 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Lsm3P62311 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Lsm3P62311 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm3P62311 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm3P62311 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Lsm3P62311 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm3P62311 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.52■□□□□ 0.4
Lsm3P62311 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.52■□□□□ 0.4
Lsm3P62311 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm3P62311 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Lsm3P62311 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm3P62311 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm3P62311 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm3P62311 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm3P62311 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm3P62311 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm3P62311 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm3P62311 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lsm3P62311 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm3P62311 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm3P62311 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.51■□□□□ 0.39
Lsm3P62311 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.51■□□□□ 0.39
Lsm3P62311 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm3P62311 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm3P62311 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm3P62311 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.51■□□□□ 0.39
Lsm3P62311 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm3P62311 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm3P62311 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm3P62311 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lsm3P62311 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.5■□□□□ 0.39
Lsm3P62311 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm3P62311 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm3P62311 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.5■□□□□ 0.39
Lsm3P62311 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm3P62311 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm3P62311 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms