Protein–RNA interactions for Protein: P61264

Stx1b, Syntaxin-1B, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1bP61264 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Stx1bP61264 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1bP61264 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1bP61264 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1bP61264 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1bP61264 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Stx1bP61264 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1bP61264 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1bP61264 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Stx1bP61264 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1bP61264 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1bP61264 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1bP61264 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1bP61264 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.75■□□□□ 0.59
Stx1bP61264 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1bP61264 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1bP61264 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.75■□□□□ 0.59
Stx1bP61264 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Stx1bP61264 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Stx1bP61264 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1bP61264 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1bP61264 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1bP61264 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.74■□□□□ 0.59
Stx1bP61264 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1bP61264 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Stx1bP61264 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Stx1bP61264 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1bP61264 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1bP61264 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1bP61264 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.74■□□□□ 0.59
Stx1bP61264 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Stx1bP61264 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1bP61264 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1bP61264 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Stx1bP61264 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
Stx1bP61264 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.74■□□□□ 0.59
Stx1bP61264 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Stx1bP61264 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1bP61264 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1bP61264 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1bP61264 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.73■□□□□ 0.59
Stx1bP61264 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1bP61264 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1bP61264 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Stx1bP61264 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.73■□□□□ 0.59
Stx1bP61264 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1bP61264 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Stx1bP61264 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1bP61264 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1bP61264 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1bP61264 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1bP61264 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Stx1bP61264 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.72■□□□□ 0.59
Stx1bP61264 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.72■□□□□ 0.59
Stx1bP61264 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1bP61264 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.72■□□□□ 0.59
Stx1bP61264 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1bP61264 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1bP61264 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Stx1bP61264 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1bP61264 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1bP61264 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1bP61264 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Stx1bP61264 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1bP61264 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Stx1bP61264 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.71■□□□□ 0.59
Stx1bP61264 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1bP61264 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1bP61264 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1bP61264 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1bP61264 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1bP61264 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Stx1bP61264 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.71■□□□□ 0.59
Stx1bP61264 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
Stx1bP61264 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Stx1bP61264 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1bP61264 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1bP61264 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1bP61264 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1bP61264 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.7■□□□□ 0.58
Stx1bP61264 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1bP61264 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1bP61264 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1bP61264 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Stx1bP61264 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.69■□□□□ 0.58
Stx1bP61264 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1bP61264 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Stx1bP61264 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1bP61264 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1bP61264 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1bP61264 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.69■□□□□ 0.58
Stx1bP61264 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1bP61264 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1bP61264 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1bP61264 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1bP61264 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Stx1bP61264 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Stx1bP61264 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1bP61264 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Stx1bP61264 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms