Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox1P53783 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox1P53783 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sox1P53783 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.76■□□□□ 0.75
Sox1P53783 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox1P53783 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox1P53783 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sox1P53783 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sox1P53783 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.76■□□□□ 0.75
Sox1P53783 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox1P53783 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox1P53783 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sox1P53783 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Sox1P53783 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox1P53783 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.75■□□□□ 0.75
Sox1P53783 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sox1P53783 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sox1P53783 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.75■□□□□ 0.75
Sox1P53783 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox1P53783 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sox1P53783 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.75■□□□□ 0.75
Sox1P53783 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.75■□□□□ 0.75
Sox1P53783 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox1P53783 Gm2399-201ENSMUST00000104944 225 ntBASIC19.74■□□□□ 0.75
Sox1P53783 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.74■□□□□ 0.75
Sox1P53783 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.74■□□□□ 0.75
Sox1P53783 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sox1P53783 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sox1P53783 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox1P53783 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Sox1P53783 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.73■□□□□ 0.75
Sox1P53783 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Sox1P53783 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.73■□□□□ 0.75
Sox1P53783 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sox1P53783 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.73■□□□□ 0.75
Sox1P53783 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox1P53783 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox1P53783 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sox1P53783 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox1P53783 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Sox1P53783 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox1P53783 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox1P53783 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.72■□□□□ 0.75
Sox1P53783 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox1P53783 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox1P53783 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.72■□□□□ 0.75
Sox1P53783 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
Sox1P53783 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sox1P53783 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sox1P53783 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sox1P53783 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox1P53783 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.71■□□□□ 0.75
Sox1P53783 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sox1P53783 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Sox1P53783 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sox1P53783 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
Sox1P53783 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sox1P53783 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.7■□□□□ 0.74
Sox1P53783 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox1P53783 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox1P53783 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.7■□□□□ 0.74
Sox1P53783 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox1P53783 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox1P53783 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Sox1P53783 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox1P53783 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox1P53783 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox1P53783 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.7■□□□□ 0.74
Sox1P53783 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sox1P53783 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox1P53783 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox1P53783 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox1P53783 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sox1P53783 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox1P53783 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sox1P53783 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox1P53783 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sox1P53783 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sox1P53783 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox1P53783 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sox1P53783 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Sox1P53783 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sox1P53783 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox1P53783 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sox1P53783 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Sox1P53783 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sox1P53783 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sox1P53783 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sox1P53783 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.68■□□□□ 0.74
Sox1P53783 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox1P53783 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox1P53783 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox1P53783 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.67■□□□□ 0.74
Sox1P53783 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox1P53783 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox1P53783 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sox1P53783 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sox1P53783 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox1P53783 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sox1P53783 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms