Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SqleP52019 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SqleP52019 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SqleP52019 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SqleP52019 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SqleP52019 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.01■□□□□ 0.95
SqleP52019 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SqleP52019 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SqleP52019 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SqleP52019 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SqleP52019 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SqleP52019 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SqleP52019 Gm7860-201ENSMUST00000121190 879 ntBASIC21■□□□□ 0.95
SqleP52019 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21■□□□□ 0.95
SqleP52019 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SqleP52019 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21■□□□□ 0.95
SqleP52019 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SqleP52019 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SqleP52019 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SqleP52019 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21■□□□□ 0.95
SqleP52019 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21■□□□□ 0.95
SqleP52019 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21■□□□□ 0.95
SqleP52019 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21■□□□□ 0.95
SqleP52019 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SqleP52019 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SqleP52019 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SqleP52019 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SqleP52019 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SqleP52019 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SqleP52019 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.98■□□□□ 0.95
SqleP52019 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.98■□□□□ 0.95
SqleP52019 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SqleP52019 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.98■□□□□ 0.95
SqleP52019 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SqleP52019 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.97■□□□□ 0.95
SqleP52019 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SqleP52019 Gm6433-201ENSMUST00000118634 875 ntBASIC20.97■□□□□ 0.95
SqleP52019 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.97■□□□□ 0.95
SqleP52019 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.97■□□□□ 0.95
SqleP52019 Gm10231-201ENSMUST00000181584 441 ntBASIC20.97■□□□□ 0.95
SqleP52019 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.97■□□□□ 0.95
SqleP52019 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SqleP52019 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SqleP52019 Gm10175-202ENSMUST00000208752 441 ntBASIC20.97■□□□□ 0.95
SqleP52019 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SqleP52019 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SqleP52019 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SqleP52019 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SqleP52019 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SqleP52019 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SqleP52019 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SqleP52019 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
SqleP52019 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SqleP52019 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.96■□□□□ 0.95
SqleP52019 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SqleP52019 Gm44549-201ENSMUST00000208351 577 ntBASIC20.96■□□□□ 0.95
SqleP52019 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.96■□□□□ 0.95
SqleP52019 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SqleP52019 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
SqleP52019 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.96■□□□□ 0.95
SqleP52019 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SqleP52019 AA386476-201ENSMUST00000098781 1665 ntBASIC20.96■□□□□ 0.95
SqleP52019 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SqleP52019 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
SqleP52019 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SqleP52019 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SqleP52019 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
SqleP52019 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.95■□□□□ 0.94
SqleP52019 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SqleP52019 Gm43799-201ENSMUST00000201845 579 ntBASIC20.95■□□□□ 0.94
SqleP52019 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SqleP52019 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SqleP52019 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SqleP52019 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SqleP52019 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SqleP52019 Gm21362-201ENSMUST00000194272 928 ntBASIC20.94■□□□□ 0.94
SqleP52019 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.94■□□□□ 0.94
SqleP52019 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SqleP52019 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SqleP52019 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SqleP52019 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SqleP52019 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SqleP52019 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SqleP52019 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SqleP52019 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SqleP52019 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SqleP52019 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SqleP52019 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SqleP52019 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms