Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC12.62□□□□□ -0.39
Xcl1P47993 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Xcl1P47993 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Xcl1P47993 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xcl1P47993 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xcl1P47993 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC12.61□□□□□ -0.39
Xcl1P47993 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xcl1P47993 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Xcl1P47993 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xcl1P47993 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Xcl1P47993 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xcl1P47993 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Xcl1P47993 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.61□□□□□ -0.39
Xcl1P47993 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.61□□□□□ -0.39
Xcl1P47993 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xcl1P47993 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Xcl1P47993 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xcl1P47993 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xcl1P47993 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xcl1P47993 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xcl1P47993 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.6□□□□□ -0.39
Xcl1P47993 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xcl1P47993 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xcl1P47993 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Xcl1P47993 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xcl1P47993 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.6□□□□□ -0.39
Xcl1P47993 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xcl1P47993 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Xcl1P47993 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Xcl1P47993 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.6□□□□□ -0.39
Xcl1P47993 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xcl1P47993 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Xcl1P47993 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Xcl1P47993 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC12.59□□□□□ -0.39
Xcl1P47993 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC12.59□□□□□ -0.39
Xcl1P47993 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Xcl1P47993 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Xcl1P47993 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Xcl1P47993 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Xcl1P47993 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xcl1P47993 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC12.58□□□□□ -0.4
Xcl1P47993 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xcl1P47993 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.58□□□□□ -0.4
Xcl1P47993 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xcl1P47993 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xcl1P47993 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Xcl1P47993 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.58□□□□□ -0.4
Xcl1P47993 AC153911.1-201ENSMUST00000220378 758 ntBASIC12.58□□□□□ -0.4
Xcl1P47993 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC12.58□□□□□ -0.4
Xcl1P47993 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xcl1P47993 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Xcl1P47993 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xcl1P47993 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xcl1P47993 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xcl1P47993 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xcl1P47993 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xcl1P47993 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Xcl1P47993 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Xcl1P47993 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.57□□□□□ -0.4
Xcl1P47993 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Xcl1P47993 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Xcl1P47993 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Xcl1P47993 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Xcl1P47993 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Xcl1P47993 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Xcl1P47993 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms