Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk2P38575 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Upk2P38575 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk2P38575 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk2P38575 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk2P38575 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk2P38575 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Upk2P38575 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
Upk2P38575 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk2P38575 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.85■□□□□ 0.29
Upk2P38575 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk2P38575 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Upk2P38575 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.85■□□□□ 0.29
Upk2P38575 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Upk2P38575 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk2P38575 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Upk2P38575 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk2P38575 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk2P38575 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Upk2P38575 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.84■□□□□ 0.29
Upk2P38575 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.84■□□□□ 0.29
Upk2P38575 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Upk2P38575 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Upk2P38575 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
Upk2P38575 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Upk2P38575 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Upk2P38575 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Upk2P38575 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Upk2P38575 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Upk2P38575 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk2P38575 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Upk2P38575 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.83■□□□□ 0.28
Upk2P38575 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk2P38575 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk2P38575 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk2P38575 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk2P38575 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Upk2P38575 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk2P38575 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk2P38575 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk2P38575 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Upk2P38575 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Upk2P38575 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.82■□□□□ 0.28
Upk2P38575 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk2P38575 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk2P38575 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk2P38575 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk2P38575 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Upk2P38575 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Upk2P38575 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Upk2P38575 Gm26833-201ENSMUST00000180899 440 ntBASIC16.81■□□□□ 0.28
Upk2P38575 Gm27801-201ENSMUST00000184174 223 ntBASIC16.81■□□□□ 0.28
Upk2P38575 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Upk2P38575 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk2P38575 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk2P38575 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk2P38575 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.8■□□□□ 0.28
Upk2P38575 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk2P38575 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk2P38575 Gm43017-201ENSMUST00000198296 752 ntBASIC16.8■□□□□ 0.28
Upk2P38575 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Upk2P38575 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk2P38575 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk2P38575 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk2P38575 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk2P38575 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.8■□□□□ 0.28
Upk2P38575 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Upk2P38575 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Upk2P38575 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk2P38575 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk2P38575 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk2P38575 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Upk2P38575 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.79■□□□□ 0.28
Upk2P38575 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Upk2P38575 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk2P38575 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Upk2P38575 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk2P38575 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Upk2P38575 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Upk2P38575 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk2P38575 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Upk2P38575 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk2P38575 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk2P38575 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.79■□□□□ 0.28
Upk2P38575 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.79■□□□□ 0.28
Upk2P38575 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk2P38575 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Upk2P38575 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Upk2P38575 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms